Dataset Open Access
Faessler, Erik;
Modersohn, Luise;
Lohr, Christina;
Hahn, Udo
The Pro(tein)/Gene corpus was developed at the JULIE Lab Jena under supervision of Prof. Udo Hahn.
The goals of the annotation project were
The corpus has the following annotation levels / entity types:
For definitions of the annotation levels, please refer to the Proteins-guidelines-final.doc file that is found in the download package.
To achieve a large coverage of biological subdomains, document from multiple other protein / gene corpora were reannotated. For further coverage, new document sets were created. All documents are abstracts from PubMed/MEDLINE. The corpus is made up of the union of all the documents in the different subcorpora.
All document are delivered as MMAX2 (http://mmax2.net/) annotation projects.
Name | Size | |
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progene.zip
md5:fa985ca0ef2c8da932db6f235422c9d9 |
24.9 GB | Download |
Faessler et al. (2020). PROGENE—A Large-scale, High-Quality Protein-Gene Annotated Benchmark Corpus, LREC 2020
All versions | This version | |
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Views | 508 | 508 |
Downloads | 234 | 234 |
Data volume | 5.8 TB | 5.8 TB |
Unique views | 435 | 435 |
Unique downloads | 160 | 160 |