Platynereis EM training data

Training data for Convolutional Neural Networks used in the publication Whole-body integration of gene expression and single-cell morphology. We provide training data for segmenting structures in the SerialBlockface Electron Microscopy data-set containing a complete 6 day old Platynereis dumerilii larva, in particular for:
- cell membranes: 9 training blocks @ resolution 20x20x25 nm. Based on initial training data provided by https://ariadne.ai/.
- cilia: 3 training and 2 validation blocks @ resolution 20x20x25 nm.
- cuticle: 5 training blocks @ resolution 40x40x50 nm.
- nuclei: 12 training blocks @ resolution 80x80x100 nm. Based on initial training data provided by https://ariadne.ai/.

For details on how to use this data for training, see https://github.com/platybrowser/platybrowser-backend/tree/master/segmentation.