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Published January 14, 2020 | Version 1.24
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edamontology/edamontology: EDAM 1.24

  • 1. @edamontology
  • 2. Institut Pasteur
  • 3. @BiGCAT-UM
  • 4. University of Freiburg

Description

See the changelog-detailed.md for a detailed list of semantic changes in the EDAM ontology.

  • revisions following mapping and gap analysis of EDAM to keywords used by IFB for tagging their resources, including IFB tools
  • revision of existing synonyms and addition of new ones
  • revision of concept preferred labels (which now better reflect the vernacular)
  • consolidation of some overlapping concepts
  • cleaned-up mixed notions of "pathway" and "network" (now neatly organised under Network analysis and Pathway analysis

Changes in hierarchy

  • 39 concepts added
  • 8 concepts deprecated

Fixed issues

  • 95 "concept or term request" issues fixed and closed (#419, #422 - #426, #429 - #449, #451 - #465, #466 - #501, #503 - #509, #511 - #517)
  • 1 issue partially fixed (#502)
  • 2 issues won't fix (#450, #466)
  • 6 bugs fixed (#427, #428, #434, 506, #508, 518)

Files

edamontology/edamontology-1.24.zip

Files (12.3 MB)

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Additional details