Info: Zenodo’s user support line is staffed on regular business days between Dec 23 and Jan 5. Response times may be slightly longer than normal.

There is a newer version of the record available.

Published December 17, 2019 | Version v0.0.1
Software Open

ICB-DCM/PEtab: PEtab v0.0.1

Creators

  • 1. @ICB-DCM @ICBmunich
  • 2. Helmholtz Munich, TUM
  • 3. @ICB-DCM

Description

Data format:

  • Update format and documentation with respect to data and parameter scales (#169)
  • Define YAML schema for grouping PEtab files, also allowing for more complex combinations of files (#183)

Library:

  • Refactor library. Reorganize petab.core functions.
  • Fix visualization w/o condition names #142
  • Extend validator
  • Removed deprecated functions petab.Problem.get_constant_parameters and petab.sbml.constant_species_to_parameters
  • Minor fixes and extensions

Files

ICB-DCM/PEtab-v0.0.1.zip

Files (2.0 MB)

Name Size Download all
md5:6d5da6530f5553a04412d3caf0c438ee
2.0 MB Preview Download

Additional details

Related works

Is supplement to
https://github.com/ICB-DCM/PEtab/tree/v0.0.1 (URL)