A small dataset for demonstrating the benchmarking of spot-detection/spot-counting workflows with BIAFLOWS

Published November 21, 2019 | Version v1.0

Dataset Open

The images were generated by SIMCEP, a widefield fluorescence microscopy biological images simulator.

The dataset contains 5 input images and 5 ground-truth images with the suffix _lbl.

Files

Name	Size	Download all
Img_0001_Spt.tif md5:8828648085ff66fa219f4b527188f5af	1.1 MB	Preview Download
Img_0001_Spt_lbl.tif md5:9d11d7a27c7ea07ea8be3683c06d7eaa	2.1 MB	Preview Download
Img_0002_Spt.tif md5:c331f1ec69db1eb391ae36011b43a706	1.1 MB	Preview Download
Img_0002_Spt_lbl.tif md5:151518c166e97f80862105bc66a55b0b	2.1 MB	Preview Download
Img_0003_Spt.tif md5:09122704ab31b1adc7328615199ad526	1.1 MB	Preview Download
Img_0003_Spt_lbl.tif md5:0ce8d4a8e9ff94de84ec3a9d6b6b0b65	2.1 MB	Preview Download
Img_0004_Spt.tif md5:a35ac135b42f62fd94f904b0573ee432	1.1 MB	Preview Download
Img_0004_Spt_lbl.tif md5:1d0589b16ae288d2484a87c29e6976b2	2.1 MB	Preview Download
Img_0005_Spt.tif md5:4befbfe1d9735b64e0b4a91193f9a7ac	1.1 MB	Preview Download
Img_0005_Spt_lbl.tif md5:824a2f99b2cfe1d392883049dfe6470a	2.1 MB	Preview Download

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Rubens, U., Mormont, R., Baecker, V., Michiels, G., Paavolainen, L., Ball, G., Ünay, D., Pavie, B., Chessel, A., Scholz, L.A., et al. (2019). BIAFLOWS: A collaborative framework to benchmark bioimage analysis workflows (Bioinformatics).