Evolution of allele frequencies in two chicken lines divergently selected for meat ultimate pH
- 1. BOA, INRA, Université de Tours, Nouzilly, France
- 2. GenPhySE, Université de Toulouse, INRA, ENVT, Castanet Tolosan, France
Description
Two lines of chicken were divergently selected during 5 generations for high or low meat ultimate pH. Genotypes at about 50K SNPs were obtained for a sample of individuals in each line and at each generation (including the founder population G0). The present dataset provides the allele frequencies for all SNP and generations in the two lines, at plink frq.strat format. The position of the SNP on the chicken genome are provided in another file at plink .map format.
These data were first ued in the following publication:
Le Bihan-Duval, E., Hennequet-Antier, C., Berri, C., Beauclercq, S. A., Bourin, M. C., Boulay, M., ... & Boitard, S. (2018). Identification of genomic regions and candidate genes for chicken meat ultimate pH by combined detection of selection signatures and QTL. BMC genomics, 19(1), 294.
Files
chicken_data.zip
Files
(2.7 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:d99cb9cff595fb30fa0c0cdedf87f30d
|
2.7 MB | Preview Download |
Additional details
Related works
- Is compiled by
- Journal article: 10.1186/s12864-018-4690-1 (DOI)
- Is required by
- Journal article: 10.1534/g3.119.400778 (DOI)
References
- Le Bihan-Duval, E., Hennequet-Antier, C., Berri, C., Beauclercq, S. A., Bourin, M. C., Boulay, M., ... & Boitard, S. (2018). Identification of genomic regions and candidate genes for chicken meat ultimate pH by combined detection of selection signatures and QTL. BMC genomics, 19(1), 294.