Software Open Access
Reconstruction Algorithms in Undersampled AFM Imaging - final code
Arildsen, Thomas; Oxvig, Christian Schou; Pedersen, Patrick Steffen; Østergaard, Jan; Larsen, Torben
This software was used for producing the simulation results for the paper "Reconstruction Algorithms in Undersampled AFM
Imaging", published in IEEE Journal of Selected Topics in Signal Processing: http://dx.doi.org/10.1109/JSTSP.2015.2500363.
This deposition consists of a number of Python scripts, some of which were used for producing the results in the accompanying data set available at http://dx.doi.org/10.5281/zenodo.32958 and some of which can be used to extract data and images from said data set. The deposition further contains a README file explaining the purpose and use of the individual files as well as MD5 and SHA checksums of the files for validating the integrity of the files after download.
The scripts are licensed under the BSD 2-Clause license (http://opensource.org/licenses/BSD-2-Clause).
The scripts perform and analyse results from simulations using images, and reconstructed versions of these, originally published in the data set available at http://dx.doi.org/10.5281/zenodo.17573.
| Name | Size | |
|---|---|---|
|
amp_bgg_solver.py
md5:28cfbee61c6a2a3ddea580caa9324c03 |
3.4 kB | Download |
|
analyse_data.ipynb
md5:e4ea6c2e8a2731b63b48eb3374a0046c |
62.4 kB | Download |
|
aspmci_reconstructions_128.py
md5:218ac136140a668a8465c715adca84a5 |
33.4 kB | Download |
|
aspmci_reconstructions_256.py
md5:56373ec1041af56b3810df7c61f8dd70 |
33.4 kB | Download |
|
extract_data_128.py
md5:752b9e4e766dbbc0c53cd88439fc1e15 |
6.7 kB | Download |
|
extract_data_256.py
md5:6c3a60d489ece917512204d1992d568c |
6.6 kB | Download |
|
extract_originals.py
md5:c76c6caf18e7ac0264b49bdf5769fbc9 |
2.8 kB | Download |
|
extract_patterns.py
md5:bc06550e72e4f06a3bd4b4475346bb9b |
1.8 kB | Download |
|
extract_recon_imgs_128.py
md5:6f85a69a8d06e0a7f265a38d617ad54f |
6.5 kB | Download |
|
extract_recon_imgs_256.py
md5:c92a60f68264a5265c9d8c5db8cdbea3 |
6.0 kB | Download |
|
extract_recon_imgs_other_128.py
md5:d473e7d0e003c24796b1b32e7087a245 |
4.7 kB | Download |
|
extract_recon_imgs_other_256.py
md5:6c8e6e3cc5fa12dd8df06ca86c57be8d |
4.7 kB | Download |
|
gamp_reconstructions.py
md5:44ce3c2a170fdc7a58c6359834097991 |
3.1 kB | Download |
|
interp_reconstructions.py
md5:c3338c67d51eb4f5d0d88a7c3ec57e70 |
6.4 kB | Download |
|
it_reconstructions.py
md5:364da33e9ceb01b8f845edbf5766d7c6 |
6.9 kB | Download |
|
LICENSE.txt
md5:69b56c72a79156627b0c7ac9a85d03db |
1.3 kB | Download |
|
MD5SUMS.txt
md5:98a5d4c24c44d46dee07ef0bc9c6e1ab |
425 Bytes | Download |
|
optim_reconstructions.py
md5:1e1a6e1ef8dd97353f9babeb86dc9882 |
14.0 kB | Download |
|
README.rst
md5:7ff4d54fc09787cdfdada00869ec9d86 |
6.0 kB | Download |
|
reconstruction_goblet_128.py
md5:4736cd9b20d0b7ddbefe3065e1e07415 |
18.9 kB | Download |
|
reconstruction_goblet_256.py
md5:e14fdc64f711aa84b4e5be0d5ae6ef07 |
18.9 kB | Download |
|
SHA256SUMS.txt
md5:18ea391cbf289a29437b38b90e45f7f8 |
681 Bytes | Download |
|
utils.py
md5:9d998c7ce1b4c6c5e44c1fac984e44ba |
20.8 kB | Download |
| All versions | This version | |
|---|---|---|
| Views | 223 | 223 |
| Downloads | 331 | 331 |
| Data volume | 3.9 MB | 3.9 MB |
| Unique views | 204 | 204 |
| Unique downloads | 112 | 112 |
- Publication date:
- October 30, 2015
- DOI:
-
- Keyword(s):
- atomic force microscopy undersampling image reconstruction sparse approximation interpolation compressed sensing
- Related identifiers:
- Cites
- Cited by
- Previous versions
- Supplementary material
- License (for files):
- BSD licenses (New and Simplified)