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Published July 3, 2019 | Version v0.22.0
Software Open

CamDavidsonPilon/lifelines: v0.22.0

  • 1. University of North Carolina
  • 2. Wave
  • 3. Fred Hutchinson Cancer Research Center
  • 4. @nubank
  • 5. @Esri
  • 6. Autodesk
  • 7. @GoodRx
  • 8. ID Analytics
  • 9. ENS de Cachan - Paris Saclay University
  • 10. Berlin Institute for Medical Systems Biology
  • 11. Bell
  • 12. Ampion, Inc.
  • 13. @TheJacksonLaboratory
  • 14. @Microsoft
  • 15. Shopify
  • 16. PhD Student @VirginiaTech
  • 17. Oncora Medical
  • 18. @IKNL
  • 19. CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences

Description

New features

  • Ability to create custom parametric regression models by specifying the cumulative hazard. This enables new and extensions of AFT models.
  • percentile(p) method added to univariate models that solves the equation p = S(t) for t
  • for parametric univariate models, the conditional_time_to_event_ is now exact instead of an approximation.
API changes
  • In Cox models, the attribute hazards_ has been renamed to params_. This aligns better with the other regression models, and is more clear (what is a hazard anyways?)
  • In Cox models, a new hazard_ratios_ attribute is available which is the exponentiation of params_.
  • In regression models, the column names in confidence_intervals_ has changed to include the alpha value.
  • In regression models, some column names in .summary and .print_summary has changed to include the alpha value.
  • In regression models, some column names in .summary and .print_summary includes confidence intervals for the exponential of the value.
  • Significant changes to internal AFT code.
  • A change to how fit_intercept works in AFT models. Previously one could set fit_intercept to False and not have to set ancillary_df - now one must specify a DataFrame.
Bug fixes
  • for parametric univariate models, the conditional_time_to_event_ is now exact instead of an approximation.

Files

CamDavidsonPilon/lifelines-v0.22.0.zip

Files (9.3 MB)

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