Published February 25, 2019 | Version v1
Dataset Open

GTEx exon-exon-junction-level expression summary for Snaptron

  • 1. Johns Hopkins University

Description

GTEx exon-level expression summary from the Snaptron collection.  Format is a tab-separated text file compressed and indexed using BGZip, along with supplementary files containing a Tabix index for the data (ending in tbi) as well as two files describing the samples represented in the columns of the data file (ending in tsv).  Uses Rail-RNA for spliced alignment.  More information at http://snaptron.cs.jhu.edu.

Notes

Supported by NIH grant R01GM118568 to BL and NIH Cloud Credits Pilot award CCREQ-2017-03-00086 to BL

Files

Files (7.5 GB)

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md5:8ab72d152b2193a47f169e63634d3ba6
7.5 GB Download
md5:003f584736a5f1888261d53e35b3433f
4.6 MB Download
md5:d398df50ec6d5cb84c28d7d5fe814779
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md5:0b6eb6d14060f74073ebf19d932580fa
23.7 MB Download

Additional details

Related works

Is supplement to
10.1038/nbt.3838 (DOI)
10.1093/bioinformatics/btx547 (DOI)
References
10.1038/ng.2653 (DOI)