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Published January 2, 2019 | Version 2.3.2
Software Open

nipy/nibabel: 2.3.2

Creators

  • 1. University of Birmingham
  • 2. Stanford University
  • 3. Dartmouth College
  • 4. Dartmouth College, @Debian, @DataLad, @PyMVPA, @fail2ban
  • 5. MIT
  • 6. INRIA
  • 7. University of Washington
  • 8. Cincinnati Children's Hospital Medical Center
  • 9. Harvard University
  • 10. The University of Washington eScience Institute
  • 11. Imeka
  • 12. FMRIB, University of Oxford
  • 13. UC Berkeley
  • 14. McGill University
  • 15. Inria
  • 16. Marianopolis College
  • 17. University of Toronto
  • 18. Genentech

Description

Bug fix release for the 2.3 series.

Most work on NiBabel so far has been by Matthew Brett (MB), Michael Hanke (MH) Ben Cipollini (BC), Marc-Alexandre Côté (MC), Chris Markiewicz (CM), Stephan Gerhard (SG), Eric Larson (EL), Yaroslav Halchenko (YOH) and Chris Cheng (CC).

References like "pr/298" refer to github pull request numbers.

2.3.2 (Wedmesday 2 January 2019) Enhancements
  • Enable toggling crosshair with Ctrl-x in OrthoSlicer3D viewer (pr/701) (Miguel Estevan Moreno, reviewed by CM)
Bug fixes
  • Read .PAR files corresponding to ADC maps (pr/685) (Gregory R. Lee, reviewed by CM)
  • Increase maximum number of items read from Siemens CSA format (Igor Solovey, reviewed by CM, MB)
  • Check boolean dtypes with numpy.issubdtype(..., np.bool_) (pr/707) (Jon Haitz Legarreta Gorroño, reviewed by CM)
Maintenance
  • Fix small typos in parrec2nii help text (pr/682) (Thomas Roos, reviewed by MB)
  • Remove deprecated calls to numpy.asscalar (pr/686) (CM, reviewed by Gregory R. Lee)
  • Update QA directives to accommodate Flake8 3.6 (pr/695) (CM)
  • Update DOI links to use https://doi.org (pr/703) (Katrin Leinweber, reviewed by CM)
  • Remove deprecated calls to numpy.fromstring (pr/700) (Ariel Rokem, reviewed by CM, MB)
  • Drop distutils support, require bz2file for Python 2.7 (pr/700) (CM, reviewed by MB)
  • Replace mutable bytes hack, disabled in numpy pre-release, with bytearray/readinto strategy (pr/700) (Ariel Rokem, CM, reviewed by CM, MB)
API changes and deprecations
  • Add Opener.readinto method to read file contents into pre-allocated buffers (pr/700) (Ariel Rokem, reviewed by CM, MB)

Files

nipy/nibabel-2.3.2.zip

Files (4.4 MB)

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Additional details

Related works

Is supplement to
https://github.com/nipy/nibabel/tree/2.3.2 (URL)