Info: Zenodo’s user support line is staffed on regular business days between Dec 23 and Jan 5. Response times may be slightly longer than normal.

Biodiversity Literature Repository
Published December 31, 2014 | Version v1
Journal article Restricted

The phylogenetic relationships of three new species of the Cyrtodactylus pulchellus complex (Squamata: Gekkonidae) from poorly explored regions in northeastern Peninsular Malaysia

Creators

Description

Grismer, L. Lee, Wood, Perry L., Anuar, Shahrul, Quah, Evan S. H., Muin, Mohd Abdul, Mohamed, Maketab, Onn, Chan Kin, Sumarli, Alexandra X., Loredo, Ariel I., Heinz, Heather M. (2014): The phylogenetic relationships of three new species of the Cyrtodactylus pulchellus complex (Squamata: Gekkonidae) from poorly explored regions in northeastern Peninsular Malaysia. Zootaxa 3786 (3): 359-381, DOI: 10.11646/zootaxa.3786.3.6

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Identifiers

URL
https://www.checklistbank.org/dataset/46000
LSID
urn:lsid:zoobank.org:pub:98B6A0EF-CAFC-4A78-B044-C5B9D6136CFB
LSID
urn:lsid:plazi.org:pub:9267FFEEFFAEFF9FFFD6FFBB2030FFE6
URL
http://publication.plazi.org/id/9267FFEEFFAEFF9FFFD6FFBB2030FFE6

Cites
Publication: 10.11646/zootaxa.3764.4.3 (DOI)
Publication: 10.11646/zootaxa.3616.3.2 (DOI)
Publication: 10.1111/zoj.12064 (DOI)
Publication: 10.1006/mpev.1999.0615 (DOI)
Publication: 10.1093/bioinformatics/14.9.817 (DOI)
Publication: 10.1016/j.ympev.2010.01.02 (DOI)
Publication: 10.1093/molbev/msr121 (DOI)
Publication: 10.1016/s1055-7903(02)00244-0 (DOI)
Publication: 10.1016/j.ympev.2012.08.025 (DOI)
Has part
Taxonomic treatment: 10.5281/zenodo.6139283 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/6E5E8796FFA6FF95FF41FE4E220AF8E3 (URL)
Taxonomic treatment: 10.5281/zenodo.6139285 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/6E5E8796FFA4FF8FFF41F8F624DDFB0E (URL)
Taxonomic treatment: 10.5281/zenodo.6139287 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/6E5E8796FFBEFF8DFF41FA8A25A8F8AB (URL)
Figure: 10.5281/zenodo.250550 (DOI)
Dataset: http://table.plazi.org/id/B2886608FFADFF9CFF41FF2220E3FF35 (URL)
Dataset: http://table.plazi.org/id/B2886608FFAAFF9BFF49FF1B21BDFF50 (URL)
Dataset: http://table.plazi.org/id/B2886608FFABFF9AFF41FE7323B5FDF9 (URL)
Dataset: http://table.plazi.org/id/B2886608FFA8FF99FF41FB39256DFB5F (URL)
Figure: 10.5281/zenodo.250551 (DOI)
Figure: 10.5281/zenodo.250552 (DOI)
Figure: 10.5281/zenodo.250553 (DOI)
Figure: 10.5281/zenodo.250554 (DOI)
Figure: 10.5281/zenodo.250555 (DOI)
Is source of
Dataset: https://www.gbif.org/dataset/839c26e6-bb6f-4258-84f3-75174e7fabdb (URL)

References

  • Chan, K.O., Wodd, P.L. Jr., Anuar, S., Muin, M.A., Quah, E.S.H., Sumaril, A.X. & Grismer, L.L. (2014) A new species of upland Stream Toad of the genus Ansonia Stoliczka, 1870 (Anura: Bufonidae) from northeastern Peninsular Malaysia. Zootaxa, 3764, 427-440.
  • http://dx.doi.org/10.11646/zootaxa.3764.4.3
  • Dring, J.C.M. (1979) Amphibians and reptiles from northern Trengganu, Malaysia, with descriptions of two new geckos: Cnemaspis and Cyrtodactylus. Bulletin of the British Museum (Natural History), 34, 181-241.
  • Drummond, A.J., Ashton, B., Buxton, S., Cheung, M., Cooper, A., Duran, C., Field, M., Heled, J., Kearse, M., Markowitz, S., Moir, R., Stones-Havas, S., Sturrock, S., Thierer, T. & Wilson, A. (2011) Geneious V5.4. Available from http:// www.geneious.com/ (accessed 19 March 2014)
  • Grismer, L.L. (1988) Phylogeny, taxonomy, classification, and biogeography of eublepharid geckos. In: Estes, R. & Pregill, G. (Eds.), Phylogenetic Relationships of the Lizard Families. Stanford University Press, Stanford, California, pp. 369-469.
  • Grismer, L.L. (2011) Lizards of Peninsular Malaysia, Singapore and Their Adjacent Archipelagos. Edition Chimaira, Frankfurt am Main, 728 pp.
  • Grismer, L.L. Anuar, S., Muin, M.A., Quah, E.S.H. & Wood, P.L. Jr. (2013a) Phylogenetic relationships and description of a new upland species of Bent-toed Gecko (Cyrtodactylus Gray, 1827) of the C. sworderi complex from northeastern Peninsular Malaysia. Zootaxa, 3616 (3), 239-252.
  • http://dx.doi.org/10.11646/zootaxa.3616.3.2
  • Grismer, L.L., Chan, K.O., Grismer, J.L., Wood, P.L. Jr. & Norhayati, A. (2010b) A checklist of the herpetofauna of the Banjaran Bintang, Peninsular Malaysia. Russian Journal of Herpetology, 17, 147-160.
  • Grismer, L.L. & Norhayati, A. (2008) A new insular species of Cyrtodactylus (Squamata: Gekkonidae) from the Langkawi Archipelago, Kedah, Peninsular Malaysia. Zootaxa, 1924, 53-68.
  • Grismer, L.L. Shahrul, A.M., Quah, E., Muin, M.A., Chan, K.O., Grismer, J.L. & Norhayati, A. (2010a) A new spiny, prehensile-tailed species of Cyrtodactylus (Squamata: Gekkonidae) from Peninsular Malaysia with a preliminary hypothesis of relationships based on morphology. Zootaxa, 2625, 40-52.
  • Grismer, L.L., Wood, P.L. Jr. , Anuar, S., Muin, M.A., Quah, E.S.H., McGuire, J.A., Brown, R.A., Ngo, V.T. & Pham, H. (2013b) Integrative taxonomy uncovers high levels of cryptic species diversity in Hemiphyllodactylus Bleeker, 1860 (Squamata: Gekkonidae) and the description of a new species from Peninsular Malaysia. Zoological Journal of the Linnean Society, 169, 849-880.
  • http://dx.doi.org/10.1111/zoj.12064
  • Grismer, L.L., Wood, Jr., P.L., Quah, E.S.H., Shahrul, A., Muin, M.A. Sumontha, M., Norhayati, A., Bauer, A.M., Wangkulangkul, S., Grismer, J.L. & Pauwels, O.S.G. (2012) A phylogeny and taxonomy of the Thai-Malay Peninsula Bent-toed Geckos of the Cyrtodactylus pulchellus complex (Squamata: Gekkonidae): combined morphological and molecular analyses with descriptions of seven new species. Zootaxa, 3520, 1-55.
  • Macey, J. & Schulte, J. (1999) Molecular Phylogenetics, Trna Evolution, and Historical Biogeography in Anguid Lizards and Related Taxonomic Families. Molecular Phylogenetics and Evolution, 12, 250-272.
  • http://dx.doi.org/10.1006/mpev.1999.0615
  • Maddison, D.R. & Maddison, W.P. (2005) Macclade 4: Analysis of Phylogeny and Character Evolution. Version 4.08a. Available from: http://macclade.org/ (accessed 19 March 2014)
  • Norhayati, A., Shukor, M.N. & Juliana, S. (2005) Inventory of Herpetofauna at Gunung Basor Forest Reserve, Kelantan. In: Shaharuddin, M.I., Dahalan, H.T., Abdullah, S.S., Jalil, M.S., Faridah-Hanum, I. & Latiff, A. (Eds.), Siri Kepelbagaian Biologi Hutan. Taman Negeri Gunung Stong, Kelantan: Pengurusan, Persekitaran Fizikal, Biologi dan Sosio-ekonomi. Jabatan Perhutanan Semenanjung Malaysia, Kuala Lumpur, pp. 191-198.
  • Posada, D. & Crandall, K.Z. (1998) Modeltest: Testing the Model of DNA Substitution. Bioinformatics, 14, 817-181. http://dx.doi.org/10.1093/bioinformatics/14.9.817
  • Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Hohna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology, 61, 539-542.
  • Siler, C.D., Oaks, J.R., Esselstyn, J.A., Diesmos, A.C. & Brown, R.M. (2010) Phylogeny and biogeography of Philippine bent- toed geckos (Gekkonidae: Cyrtodactylus) contradict a prevailing model of Pleistocene diversification. Molecular Phylogenetics and Evolution, 55, 699-710.
  • http://dx.doi.org/10.1016/j.ympev.2010.01.02
  • Stamatakis, A., Hoover, P. & Rougemont, J. (2008) A rapid bootstrap algorithm for the RAxML web servers. Systematic Biology, 57, 758-771.
  • Sumontha, M., Pauwels, O.S.G., Kunya, K., Nitikul, A., Samphanthamit, P. & Grismer, L.L. (2012) A new forest-dwelling gecko from Phuket Island, Southern Thailand, related to Cyrtodactylus macrotuberculatus (Squamata: Gekkonidae). Zootaxa, 3522, 61-72.
  • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2010) MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution, 28, 2731-2739.
  • http://dx.doi.org/10.1093/molbev/msr121
  • Wikramanayake, E., Dinerstein, E., Loucks, C., Olson, D., Morrison, J., Lamoreux, J., McKnight, M. & Hedao, P. (Eds.) (2002) Terrestrial Ecoregions of the Indo-Pacific: A Conservation Assessment. Island Press, Washington, D.C., xxix + 643 pp.
  • Wilcox, T.P., Zwickl, D.J., Heath, T.A. & Hillis, D.M. (2002) Phylogenetic relationships of the Dwarf Boas and a comparison of Bayesian and bootstrap measures of phylogenetic support. Molecular Phylogenetics and Evolution, 25, 361-371. http://dx.doi.org/10.1016/s1055-7903(02)00244-0
  • Wood, Jr., P.L., Heinicke, M.P., Jackman, T.R. & Bauer, A.M. (2012) Phylogeny of Bent-toed geckos (Cyrtodactylus) reveals a west to east pattern of diversification. Molecular Phylogenetics and Evolution, 65, 992-1003. http://dx.doi.org/10.1016/j.ympev.2012.08.025