Journal article Open Access
Processed data for "clonealign: statistical integration of independent single-cell RNA & DNA-seq from human cancers"
Campbell, Kieran R
Processed single-cell RNA-seq and single-cell DNA-seq (CNV) data for "clonealign: statistical integration of independent single-cell RNA & DNA-seq from human cancers"
This tar.gz has the following directory structure:
"SA501" and "T_OV2295" directories indicate the experiment (SA501 PDX or OV2295 cell line). Within each are "10X" and "cnv" directories:
- The 10X directories contain the CellRanger output (barcodes.tsv, genes.tsv, matrix.mtx) for each each sample
- The cnv directory contains processed copy number calls for all single cells and aggregated to clone levels
Files
(131.1 MB)
| Name | Size | |
|---|---|---|
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clonealign-processed-data.tar.gz
md5:7fb68a92aea00bdfd2d439d7fcbaa371 |
131.1 MB | Download |
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| Views | 257 | 255 |
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| Data volume | 12.2 GB | 12.2 GB |
| Unique views | 230 | 228 |
| Unique downloads | 73 | 73 |
Indexed in
- Publication date:
- December 17, 2018
- DOI:
-
- License (for files):
- Creative Commons Attribution 4.0 International