Published October 21, 2016
| Version v1.0
Software
Open
C3BI-pasteur-fr/CoreGeneBuilder
Creators
- 1. Microbial Evolutionary Genomics, Institut Pasteur, Paris, France, Institut Pasteur–Hub Bioinformatique et Biostatistique–C3BI, USR 3756 IP CNRS, Paris, France, UMS 3601 IFB-Core CNRS, Gif-sur-Yvette, France
- 2. Microbial Evolutionary Genomics, Institut Pasteur, Paris, France, UMR3525, CNRS, Paris, France
- 3. Bioinformatics and Biostatistics Hub, Institut Pasteur, Paris, France, USR3756 CNRS, Paris, France
- 4. Bioinformatics and Biostatistics Hub, Institut Pasteur Paris, France, USR3756 CNRS, Paris, France
Contributors
Other:
- 1. Bioinformatics and Biostatistics Hub, Institut Pasteur Paris, France, USR3756 CNRS, Paris, France
Description
CoreGeneBuilder can be used to extract a core genome (or a persistent genome) from a given set of bacterial genomes.
Files
C3BI-pasteur-fr/CoreGeneBuilder-v1.0.zip
Files
(9.4 MB)
| Name | Size | Download all |
|---|---|---|
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md5:55be3127372b33bbfd7e8e160df27308
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9.4 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/C3BI-pasteur-fr/CoreGeneBuilder/tree/v1.0 (URL)
Subjects
- Sequence classification
- http://edamontology.org/operation_2995
- Sequence distance matrix generation
- http://edamontology.org/operation_0289
- Genome annotation
- http://edamontology.org/operation_0362
- Sequence clustering
- http://edamontology.org/operation_0291
- Gene and protein families
- http://edamontology.org/topic_0623