Published November 3, 2016 | Version v1
Dataset Restricted

Gene annotations for <i>Strix occidentalis caurina</i> draft nuclear genome assembly version 1

Authors/Creators

  • 1. California Academy of Sciences, San Francisco, California, United States of America; Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California, United States of America; Department of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America
  • 2. California Academy of Sciences, San Francisco, California, United States of America
  • 3. Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America; California Academy of Sciences, San Francisco, California, United States of America
  • 4. Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California, United States of America; Department of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America
  • 5. California Academy of Sciences, San Francisco, California, United States of America; UMR 7205 Institut de Systématique, Evolution, Biodiversité, CNRS, MNHN, UPMC, EPHE, Sorbonne Universités, Département Systématique et Evolution, Muséum National d’Histoire Naturelle, Paris, France
  • 6. Department of Biochemistry and Biophysics, University of California San Francisco, San Francisco, California, United States of America; Howard Hughes Medical Institute, Bethesda, Maryland, United States of America; Runckel & Associates, Portland, Oregon, United States of America
  • 7. Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California, United States of America
  • 8. Department of Biochemistry and Biophysics, University of California San Francisco, San Francisco, California, United States of America; Howard Hughes Medical Institute, Bethesda, Maryland, United States of America

Description

NSO-wgs-v1-nuc.gff.bz : This file provides the gene annotations produced by the MAKER pipeline for the Strix occidentalis caurina draft whole nuclear genome assembly, NSO-wgs-v1-nuc.

NSO-wgs-v1-nuc-masked-homology-includes-LowComplexity.out.bz : This file provides the repeat annotations produced by the homology-based masking of NSO-wgs-v1-nuc that included masking of low complexity regions and simple repeats.

NSO-wgs-v1-nuc-masked-DeNovo-includes-LowComplexity.out : This file provides the repeat annotations produced by the de novo masking of NSO-wgs-v1-nuc that included masking of low complexity regions and simple repeats.

NSO-wgs-v1-nuc-masked-homology-no-LowComplexity.out.bz : This file provides the repeat annotations produced by the homology-based masking of NSO-wgs-v1-nuc that did not include masking of low complexity regions and simple repeats.

NSO-wgs-v1-nuc-masked-DeNovo-no-LowComplexity.out : This file provides the repeat annotations produced by the de novo masking of NSO-wgs-v1-nuc that did not include masking of low complexity regions and simple repeats.

Files

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