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Published November 2, 2018 | Version 0.4.2
Software Open

kaczmarj/neurodocker: Version 0.4.2

Creators

  • 1. MIT
  • 2. Centre for Advanced Imaging
  • 3. Dartmouth College, @Debian, @DataLad, @PyMVPA, @fail2ban
  • 4. Mayo Clinic
  • 5. University of Pennsylvania
  • 6. Stanford University
  • 7. Child Mind Institute
  • 8. The University of Washington eScience Institute

Description

Additions

  • Ability to output JSON representation of the neurodocker specification
  • exclude_paths option in FSL to exclude specific paths from tarball extraction
  • Python 3.7 support
Fixes
  • Install shared libraries required for matlab compiler runtime 2010a
  • Add back in nlopt dependency in afni
  • PATH variable in afni
Enhancements
  • Allows use of miniconda base environment (--miniconda use_env=base ...
  • Adds ANTs versions 2.3.1 and 2.3.1, statically compiled on CentOS 6
  • Adds matlab compiler runtime 2018b
  • Misc. improvements to the reprozip trace wrapper shell script
  • Installs desktop manager when installing VNC
  • Raises more specific error on dockerfile / singularity recipe generation

Files

kaczmarj/neurodocker-0.4.2.zip

Files (94.6 kB)

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md5:241975435786aea8e53645ca56fecb5c
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Additional details

Related works

Is supplement to
https://github.com/kaczmarj/neurodocker/tree/0.4.2 (URL)