Published September 2, 2024 | Version v1
Journal article Open

Tscherskia ningshaanensis: A neglected species based on phylogenetic and taxonomic analysis of Tscherskia and Cansumys (Cricetidae, Rodentia)

  • 1. Zhengzhou University, Zhengzhou, China
  • 2. Sichuan Academy of Forestry, Chengdu, China
  • 3. Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China

Description

The greater long-tailed hamster is primarily distributed in North Korea, Siberia (Russia), and central and northern China, while the Gansu hamster is restricted to southern Gansu Province, China. The genera Tscherskia and Cansumys have each been considered monotypic. The taxonomic status of these two genera has long been debated, and the specific status of T. ningshaanensis has also been contentious. Researchers have variously treated T. ningshaanensis as a subspecies of either T. triton or Can. canus. In this study, we estimated the phylogeny, divergence times, species delimitation, and biogeographical history of T. ningshaanensis by using one mitochondrial (CYT B) and three nuclear loci (GHR, IRBP, and RAG1) and compared the external and skull morphology variations between T. ningshaanensis and T. triton. The results showed that: 1) The genus Cansumys is a distinct genus in Cricetinae; 2) The notion that the genus Tscherskia is a monotypic genus is unsupported, T. ningshaanensis and T. triton were identified within this genus; and 3) The formation of T. ningshaanensis may have been driven by uplift of the Qinling Mountains. We conclude that T. ningshaanensis is a valid species within the subfamily Cricetinae.

Files

ZSE_article_128567.pdf

Files (3.2 MB)

Name Size Download all
md5:8737132b9dd6ff2276e865294825c5f6
3.2 MB Preview Download

System files (176.0 kB)

Name Size Download all
md5:56d9889275391a6272f52030d8789ced
176.0 kB Download

Linked records

Additional details

References

  • Allen GM (1925) Hamsters collected by the American Museum Asiatic Expeditions. American Museum novitates; no. 179. American Museum of Natural History, New York City.
  • Allen GM (1928) A New Cricetine Genus from China. Journal of Mammalogy 9: 244–246. https://doi.org/10.2307/1373275
  • Argyropulo A (1933) Die Gattungen und Arten der Hamster (Cricetinae Murray, 1866) der Paläarktik. Zeitschrift für Säugetierkunde 8: 129–149.
  • Bradley RD, Baker RJ (2001) A Test of the Genetic Species Concept: Cytochrome-b Sequences and Mammals. Journal of Mammalogy 82: 960–973. https://doi.org/10.1644/1545-1542(2001)082<0960:ATOTGS>2.0.CO;2
  • Camargo A, Morando M, Avila LJ, Sites JW (2012) Species delimitation with abc and other coalescent-based methods: a test of accuracy with simulations and an empirical example with lizards of the Liolaemus Darwinii complex (Squamata: Liolaemidae). Evolutionary Anthropology 66: 2834–2849. https://doi.org/10.1111/j.1558-5646.2012.01640.x
  • Chen FG, Min ZL (1982) Taxonomic review of sevenal speceis in Rondents. Zoological research 3: 369–374.
  • Cheng F, He K, Chen ZZ, Zhang B, Wan T, Li JT, Zhang BW, Jiang XL (2017) Phylogeny and systematic revision of the genus Typhlomys (Rodentia, Platacanthomyidae), with description of a new species. Journal of Mammalogy 98: 731–743. https://doi.org/10.1093/jmammal/gyx016
  • Corbet GB, Hill. JE (1992) Mammals of the Indomalayan region. A systematic review. Oxford University Press, Oxford.
  • Darriba D, Taboada GL, Doallo R, Posada D (2012) jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9: 772–772. https://doi.org/10.1038/nmeth.2109
  • de Winton W (1899) On Chinese mammals, principally from Western Sechuen, with notes on Chinese squirrels. Proceedings of the Zoological Society of London 67: 572–578. https://doi.org/10.1111/j.1469-7998.1899.tb06875.x
  • Dong Y, Shi X, Sun S, Sun J, Hui B, He D, Chong F, Yang Z (2022) Co-evolution of the Cenozoic tectonics, geomorphology, environment and ecosystem in the Qinling Mountains and adjacent areas, Central China. Geosystems and Geoenvironment 1: 100032. https://doi.org/10.1016/j.geogeo.2022.100032
  • Drummond AJ, Suchard MA, Xie D, Rambaut A (2012) Bayesian Phylogenetics with BEAUti and the BEAST 1.7. Molecular Biology and Evolution 29: 1969–1973. https://doi.org/10.1093/molbev/mss075
  • Ellerman JR (1941) The families and genera of living rodents. Volume II. Muridae. Vol. 2,British Museum, London.
  • Ellerman JR, Morrison-Scott TCS (1951) Checklist of Palaearctic and Indian mammals, 1758–1946. https://www.biodiversitylibrary.org/bibliography/8602
  • Galewski T, Tilak M, Sanchez S, Chevret P, Paradis E, Douzery EJP (2006) The evolutionary radiation of Arvicolinae rodents (voles and lemmings): relative contribution of nuclear and mitochondrial DNA phylogenies. BMC Evolutionary Biology 6: 80. https://doi.org/10.1186/1471-2148-6-80
  • Gu Y, Ma Y, Sun YH (2005) A Rediscussion on the Taxonomic Status of Cansumys canus. Chinese Jounal ef Zoology 40: 116–120.
  • Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology 59: 307–321. https://doi.org/10.1093/sysbio/syq010
  • He K, Li YJ, Brandley MC, Lin LK, Wang YX, Zhang YP, Jiang XL (2010) A multi-locus phylogeny of Nectogalini shrews and influences of the paleoclimate on speciation and evolution. Molecular Phylogenetics and Evolution 56: 734–746. https://doi.org/10.1016/j.ympev.2010.03.039
  • Heled J, Drummond AJ (2010) Bayesian inference of species trees from multilocus data. Molecular Biology and Evolution 27: 570–580. https://doi.org/10.1093/molbev/msp274
  • Hír J (1994) Cricetinus beremendensis sp. n. (Rodentia, Mammalia) from the Pliocene fauna of Beremend 15. (S Hungary). Fragmenta Mineralogica et Paleontologica 17: 71–89.
  • Ho H (1934) A new subspecies of Cricetidae from Shansi. Contributions from the Biological Laboratory of Science Society of China, Naking Zoological Series 10: 288–291.
  • Huelsenbeck JP, Rannala B (2004) Frequentist Properties of Bayesian Posterior Probabilities of Phylogenetic Trees Under Simple and Complex Substitution Models. Systematic Biology 53: 904–913. https://doi.org/10.1080/10635150490522629
  • Jin CZ, Zhang YQ, Wei GB, Cui N, Wang Y (2009) Rodentia. In: Jin CZ, Liu JY, eds. Paleolithic Site—The Renzidong Cave, Fanchang, Anhui Province. Science Press, Beijing.
  • Kishida K (1929) A synopsis of Corean hamsters. In., Lansania, Tokyo 1–160.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K (2018) MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms. Molecular Biology and Evolution 35: 1547–1549. https://doi.org/10.1093/molbev/msy096
  • Lebedev VS, Bannikova AA, Neumann K, Ushakova MV, Ivanova NV, Surov AV (2018) Molecular phylogenetics and taxonomy of dwarf hamsters Milne-Edwards, 1867 (Cricetidae, Rodentia): description of a new genus and reinstatement of another. Zootaxa 4387: 331–349. https://https://doi.org/10.11646/zootaxa.4387.2.5
  • Liao J, Xiao Z, Dong Y, Zhang Z, Liu N, Li J (2007) Taxonomic status of Cansumys canus (Allen,1928). Acta Zoologica Sinica 53: 44–53.
  • Lu JQ (1997) The Study on the Geocraphical Division ofGlires in Henan Province. Journal of Henan Normal University (Natural Science) 25: 68–71. https://doi.org/10.16366/j.cnki.1000-2367.1997.02.017
  • Minh BQ, Nguyen MA, von Haeseler A (2013) Ultrafast approximation for phylogenetic bootstrap. Molecular Biology and Evolution 30: 1188–1195. https://doi.org/10.1093/molbev/mst024
  • Musser GG, Carleton. MD (1993) Family Muridae. Pp. 501–755, in: Mammal species of the world, a taxonomic and geographic reference, Second ed. (D. E. Wilson and D. M. Reeder, eds.). Smithsonian Institution Press, Washington D. C xviii.
  • Neumann K, Michaux J, Lebedev V, Yigit N, Colak E, Ivanova N, Poltoraus A, Surov A, Markov G, Maak S, Neumann S, Gattermann R (2006) Molecular phylogeny of the Cricetinae subfamily based on the mitochondrial cytochrome and 12S rRNA genes and the nuclear vWF gene. Molecular Phylogenetics and Evolution 39: 135–148. https://doi.org/10.1016/j.ympev.2006.01.010
  • Ognev SI (1914) Die saugetiere aus dem sudlichen Ussurigebiet (the mammals of the southern Ussuri). Journal de la Section Zoologique de la Societe des Amis des Sciences Naturelles, d'Anthropologie et d'ethnographie 2: 101–128.
  • Pavlinov IY, Yakhontov. EL, Agadzhanyan AK (1995a) Mammals of Eurasia. I. Rodentia. Taxonomic and geographic guide. Vol. 32, Archives of the Zoological Museum, Moscow State University.
  • Rambaut A, Drummond AJ, Xie D, Baele G, Suchard MA (2018) Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7. Systematic Biology 67: 901–904. https://doi.org/10.1093/sysbio/syy032
  • Ross P (1988) The taxonomic status of Cansumys canus. Abstracts, Symposium of Asian Pacific Mammalogy. Huirou, Beijing,Peoples Republic of China, 245 pp.
  • Smith AT, Xie Y (2008) A Guide to the Mammals of China. Princeton University Press, Princeton, New Jersey, 135–144.
  • Song S (1985) A new subspecies of Cricetulus triton from Shananxi, China. Acta Theriological Sinica 5: 137–139.
  • Steppan SJ, Storz BL, Hoffmann RS (2004) Nuclear DNA phylogeny of the squirrels (Mammalia: Rodentia) and the evolution of arboreality from c-myc and RAG. Molecular Phylogenetics and Evolution 30: 703–719. https://doi.org/10.1016/S1055-7903(03)00204-5
  • Teeling EC, Scally M, Kao DJ, Romagnoli ML, Springer MS, Stanhope MJ (2000) Molecular evidence regarding the origin of echolocation and flight in bats. Nature 403: 188–192. https://doi.org/10.1038/35003188
  • Thomas O (1907) The Duke of Bedford's zoological expedition in eastern Asia. V. Second list of mammals from Korea. Proceedings of Zoological Society of London 32: 462–466. https://doi.org/10.1111/j.1469-7998.1907.tb06941.x
  • Thomas O (1908) Cricetulus triton incanus subsp. n. In: Woodward H. Abstract of the proceedings of the zoological society of london 63: 43–46.
  • Trifinopoulos J, Nguyen L-T, von Haeseler A, Minh BQ (2016) W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis. Nucleic Acids Research 44: 232–235. https://doi.org/10.1093/nar/gkw256
  • Venczel M, Gardner JD (2005) The geologically youngest albanerpetontid amphibian, from the lower Pliocene of Hungary. Palaeontology 48: 1273–1300. https://doi.org/10.1111/j.1475-4983.2005.00512.x
  • Wang TZ, Xu WX (1992) Glires (Rodentia and Lagomorpha) fauna of Shaanxi Province. Shaanxi Normal University Press, Xian.
  • Wang S, Zheng CL (1973) Notes on Chinese Hamsters(Cricetinae). Acta Zoologica Sinica 19: 61–68.
  • Wang X, Zattin M, Li J, Song C, Peng T, Liu S, Liu B (2011) Eocene to Pliocene exhumation history of the Tianshui-Huicheng region determined by Apatite fission track thermochronology: Implications for evolution of the northeastern Tibetan Plateau margin. Journal of Asian Earth Sciences 42: 97–110. https://doi.org/10.1016/j.jseaes.2011.04.012
  • Wei F, Yang Q, Wu Y, Jiang X, Liu S, Li B, YANG G, Li M, Zhou J, Li S, Hu Y, Ge D, Li S, YU W, Chen B, Zhang Z, Zhou C, Wu S, Zhang L, Chen Z, Chen S, Deng H, Jiang T, Zhang L, Shi H, Lu X, Li Q, Liu Z, Cui Y, Li Y (2021) Catalogue of mammals in China(2021). Acta Theriological Sinica 41: 487–501. https://doi.org/10.16829/j.slxb.150595
  • Wilson DE, Mittermeier RA, Lacher TE (2017) Handbook of the Mammals of the World, Vol. 7: Rodents II. Vol. 7, Lynx Edicions, Barcelona, Spain.
  • Xie K, Zhang YX, Li YX (2021) Revision to from the Houhecun Fauna and a New Discovery of (Cricetidae, Rodentia) from the Youhe Fauna of Weinan, Shaanxi Province, China. Acta Geologica Sinica-English Edition 95: 1073–1079. https://doi.org/10.1111/1755-6724.14776
  • Xie K, Zhang YX, Li YX (2023) Large-sized fossil hamsters from the late Middle Pleistocene Locality 2 of Shanyangzhai, China, and discussion on the validity of Cricetinus and C. varians (Rodentia: Cricetidae). Peerj 11. https://doi.org/10.7717/peerj.15604
  • Yang ZH, Rannala B (2014) Unguided species delimitation using DNA sequence data from multiple Loci. Molecular Biology and Evolution 31: 3125–3135. https://doi.org/10.1093/molbev/msu279
  • Yang L, Chen X, Zhao X, Wang J (2003) Karyotype and Classif ication Status of Cansumys canus (Cricetidea, Rodentia). Acta Theriological Sinica 23: 235–238. https://doi.org/10.16829/j.slxb.2003.03.010
  • Yang QS, Xia L, Ma Y, Feng ZJ, Quan GQ (2005) A guide to the measurement of mammal skull I: Basic measurement. Chinese Journal of Zoology 40: 50–56. https://doi.org/10.13859/j.cjz.2005.03.011
  • Yue LP, Xue XX (1996) Palaeomagnetism of Chinese Loess. Geology Press, Beijing.
  • Zheng SH (1984a) Revised determination of the fossil Cricetine (Rodentia, Mammalia) of Choukoutien district. Vertebrata PalAsiatica 22: 179–197. https://doi.org/10.19615/j.cnki.1000-3118.1984.03.002
  • Zheng SH (1984b) A new species of Kowalskia (Rodentia, Mammalia) of Yinan, Shandong. Vertebrata PalAsiatica 22: 251–260. https://doi.org/10.19615/j.cnki.1000-3118.1984.04.001
  • Zheng SH (1993) Quaternary rodents of Sichuan-Guizhou area, China. Science Press., Beijing.