Published August 21, 2024
| Version v1
Journal article
Open
Three new ramarioid species of Phaeoclavulina (Gomphaceae, Gomphales) from China
Authors/Creators
- 1. Hunan Normal University, Changsha, China
- 2. Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
Description
Three new species of Phaeoclavulina from China are described: Phaeoclavulina bicolor, P. echinoflava, and P. jilinensis. Recognition of the new species is supported by morphological and molecular evidence. Phylogenetic analyses of concatenated ITS1–5.8S–ITS2 and nuclear large subunit sequences support the establishment of the new species and their placement within the Phaeoclavulina clade. A key to the known Phaeoclavulina species in China is provided.
Files
MC_article_128716.pdf
Files
(11.1 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:56ffe8384325f0060571ff3130c11b6d
|
11.1 MB | Preview Download |
System files
(159.5 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:83ea58fa75bd858bc28388bf5ef319c1
|
159.5 kB | Download |
Linked records
Additional details
References
- Brinkmann W (1897) Vorarbeiten zu einer Pilzflora Westfalen. Jahresbericht des Westfälischen Provinzial-Vereins für Wissenschaft und Kunst 25: 195–207.
- Corner EJH (1970) Supplement to "A monograph of Clavaria and allied genera". Beihefte zur Nova Hedwigia 33: 87–92.
- Dai YC, Zhou LW, Yang ZL, Wen HA, Tolgor B, Li TH (2010) A revised checklist of edible fungi in China. Mycosystema 29(1): 1–21.
- Franchi P, Marchetti M (2018) Nomenclatural novelties. Index Fungorum 373: 1.
- Franchi P, Marchetti M (2019) Nuove combinazioni nel Genere Phaeoclavulina. RIvis ta di Micologia 62: 19–40.
- Franchi P, Marchetti M (2020) Nomenclatural novelties. Index Fungorum 457: 1–7.
- Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Molecular Biology 2: 113–118. https://doi.org/10.1111/j.1365-294X.1993.tb00005.x
- Giachini AJ (2004) Systematics, phylogeny, and ecology of Gomphus sensu lato. Doctoral Dissertation. Oregon State University, Corvallis.
- Giachini AJ, Castellano MA (2011) A new taxonomic classification for species in Gomphus sensu lato. Mycotaxon 115(1): 183–201. https://doi.org/10.5248/115.183
- Giachini AJ, Hosaka K, Nouhra E, Spatafora J, Trappe JM (2010) Phylogenetic relationships of the Gomphales based on nuc25S-rDNA, mit-12S-rDNA, and mit-atp6-DNA combined sequences. Fungal Biology 114(2–3): 224–234. https://doi.org/10.1016/j.funbio.2010.01.002
- González-Vila A, Martínez-González R, Espinosa D, Estrada-Torres A (2020) Phaeoclavulina liliputiana sp. nov. (Gomphaceae, Gomphales) a new endemic species from Tlaxcala, Mexico. Phytotaxa 470: 155–164. https://doi.org/10.11646/phytotaxa.470.2.4
- Hall TA (1999) BioEdit: A user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symposium Series 41: 95–98.
- Hughes K, Petersen R, Justice J (2014) Two new species of Ramaria from Arkansas. MycoKeys 8: 17–29. https://doi.org/10.3897/mycokeys.8.7356
- Katoh K, Standley DM (2016) A simple method to control over-alignment in the MAFFT multiple sequence alignment program. Bioinformatics 32(13): 1933–1942. https://doi.org/10.1093/bioinformatics/btw108
- Kornerup A, Wanscher JH (1978) Methuen handbook of colour, 3rd edn. Methuen, London, 1–252.
- Kříž M, Jindřich O, Kolařík M (2019) Contribution to the knowledge of mycobiota of Central European dry grasslands: Phaeoclavulina clavarioides and Phaeoclav ulina roellinii (Gomphales). Czech Mycology 71(2): 137–150. https://doi.org/10.33585/cmy.71202
- Li JZ (2008) Study on wild edible fungi species diversity from Hunan. Life Science Research 12(4): 314–321.
- Liu WH, Yan J, Deng PT, Qin WQ, Zhang P (2022) Two new species of Phaeoclavulina (Gomphaceae, Gomphales) from Hunan Province, China. Phytotaxa 561(1): 3. https://doi.org/10.11646/phytotaxa.561.1.3
- Nylander JAA (2004) MrModeltest v2.0. Program distributed by the author, Evolutionary Biology Centre, Uppsala, Sweden.
- Petersen RH (1981) Ramaria subgenus Echinoramaria. Bibliotheca Mycologica 79: 1–261.
- Rambaut A (2012) FigTree v1.4. University of Edinburgh, Edinburgh, UK. https://tree.bio.ed.ac.uk
- Ridgway R (1912) Color standards and color nomenclature. Published by the author, Washington. https://doi.org/10.5962/bhl.title.144788
- Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP (2012) MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice a cross a large model space. Systematic Biology 61(3): 539–542. https://doi.org/10.1093/sysbio/sys029
- Stamatakis A (2006) RAxML-VI-HPC: Maximum likelihoodbased phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22(21): 2688–2690. https://doi.org/10.1093/bioinformatics/btl446
- Stamatakis A, Ludwig T, Meier H (2005) RAxML-III: A fast program for maximum likelihood-based inference of large phylogenetic trees. Bioinformatics 21(4): 456–463. https://doi.org/10.1093/bioinformatics/bti191
- Stamatakis A, Hoover P, Rougemont J (2008) A rapid bootstrap algorithm for the raxml web servers. Systematic Biology 57(5): 758–771. https://doi.org/10.1080/10635150802429642
- Teng SC (1963) Fungi of China. Science Press. Beijing.
- Vaidya G, Lohman DJ, Meier R (2011) Sequencematrix: Concatenation software for the fast assembly of multi-gene datasets with character set and codon information. Cladistics 27(2): 171–180. https://doi.org/10.1111/j.1096-0031.2010.00329.x
- Vilgalys R, Hester M (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172(8): 4238–4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990
- Wannathes N, Kaewketsri R, Suwannarach N, Kumla J, Lumyong S (2018) Phaeoclavulina pseudozippelii sp. nov. (Gomphales, Basidiomycota) from Northern Thailand. Phytotaxa 362: 211–219. https://doi.org/10.11646/phytotaxa.362.2.7
- White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols, a guide to methods and applications. Academic Press, 315–322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
- Xu YY, Jian SP, Mao N, Yang ZL, Fan L (2022) Gomphocantharellus, a new genus of Gomphales. Mycologia 114(4): 748–756. https://doi.org/10.1080/00275514.2022.2065781
- Zhang P, Yang ZL, Ge ZW (2005) Two new species of Ramaria from southwestern China. Mycotaxon 94: 235–240.