Published July 13, 2018 | Version Version 1.1
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PlaScope E. coli database

  • 1. CEA-LABGeM - IAME-Inserm -APHP

Description

Database required to run PlaScope on E. coli genomes.

After extracting the tar.gz file, you will have 3 files : chromosome_plasmid_db.1.cf, chromosome_plasmid_db.2.cf and chromosome_plasmid_db.3.cf. All these files are required for PlaScope. The argument --db_dir in PlaScope is the path to the directory where these 3 files are located, and the argument --db_name in this case is "chromosome_plasmid_db".

Files

Files (330.9 MB)

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md5:1010ae59f1b1dcbd5c93dd463dbbcf85
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