"First fertilizing-value typology of digestates". Associated R code and database. Suez data omitted.

R code associated to the publication Guilayn et al. 2017, entitled "First fertilizing-value typology of digestates". Co-authors:

F. GUILAYNª*, J. JIMENEZª, M. ROUEZ*, M. CREST*, D. PATUREAUª. a. LBE, INRA, Univ Montpellier, 102 avenue des Etangs, 11100, Narbonne. *. Suez, CIRSEE, 38 rue du Président Wilson, 78230, Le Pecq, France.

The input data, i.e., the associated database to the publication consists of the "Guilayn et al. 2018 INPUT DATA.xlsx" file. Please consider checking the "Readmine" sheet on this Excel file. Data from SUEZ is omitted in this excel file due to confidentialy reason. Please contact us for further information if you wish to have acess to this data. By fully running the R script "Guilayn et al. 2017 - Digestate typology.R", and with the complete database, one can reproduce the same figures presented in the paper. The R code is divded in sections. In this sections, the same loop applies the same handling, statistics and plots to each dataset presented in Table 1 (c.f. paper).

• Figure 1 (in paper) is "digestate_typology\all\HCA\ALL_HCA_HEATMAP.ward.D2_FINAL.pdf" after aesthetical modifications with an image editor.
• Figure 2 (in paper) is the figure "digestate_typology\raw\PCA\RAW_PCAbiplot.HCAgroups.pdf" after minor aesthetical adjustments (such as variable names).
• Figure 3 (in paper) was created with an image editor by combining the following files:
  • "digestate_typology\raw\Boxplots\RAW_singleplot.pdf"
  • "digestate_typology\sld\Boxplots\SLD_singleplot.pdf"
  • "digestate_typology\liq\Boxplots\LIQ_singleplot.pdf"
• Figure 4 (in paper) is the figure "digestate_typology\raw\Boxplots_LEGISLATION\RAW_legislation_basics_singleplot.pdf" after minor aesthetical adjustments. Legislation limits were added manually with an image editor.
• Figure 5 (in paper) is the figure "digestate_typology\raw\Boxplots_LEGISLATION\RAW_heavy_metals_singleplot.pdf" after minor aesthetical adjustments. Legislation limits were added manually with an image editor.

Please contact me at felipe.guilayn@suez.com or felipe.guilayn@gmail.com for further information or help.