Dataset Open Access

BeechCOSTe52 Database

Robson, T. Matthew; Benito Garzón, Marta; Alia Miranda, Ricardo; Barba Egido, Diana; Bogdan, Saša; Borovics, Attila; Božič, Gregor; Brendel, Oliver; Clark, Jo; De Vries, Sven M G; Delehan, Ivan I.; Doody, Pat; Ducousso, Alexis; Fady, Bruno; Fennessy, John; Forstreuter, Manfred; Frýdl, Josef; Geburek,Thomas; Gömöry, Dušan; Hauke-Kowalska, Maria; Huber, Gerhard; Ibañez, Juan Ignacio; Ioniţă, Lucia; Ivankovič, Mladen; Kehlet Hansen, Jon; Kóczán-Horváth, Anikó; Kraigher, Hojka; Kranenborg, K Gert; Lee, Steve; Liesebach, Mirko; Mátyás, Csaba; Mertens, Patrick; Muhs, Hans-Joachim; Novotný, Petr; Parnuţa, Gheorghe; Paule, Ladislav; Picardo, Alvaro; Rasztovics, Ervin; Rogge, Martin; Stener, Lars-Göran; Sułkowska, Małgorzata; Urban, Otmar; v. Wuehlisch, Georg; Vendramin, Giovanni G; Vettori, Cristina; Wesoły, Wojciech

The BeechCOSTe52 includes phenotypic trait measurements from individual trees measured in an international network of provenance tests compiled by the COST Action E52 (2006 – 2010). It comprises 39 trial sites and 217 provenances covering the distribution of European beech (Fagus sylvatica L.). The BeechCOSTe52 database provides individual tree phenotypic measurements of height, diameter at breast height, basal diameter, mortality, spring and autumn leaf phenology. The following files are included:

Fsylvatica.csv: individual tree measurements by trial and provenance of origin.

Trials_coords.csv: geographical coordinates of the trials

Prov_coords.cvs: geographical coordinates of the provenances

BeechCOSTe52_metadata_descriptor.docx: description of the fields of Fsylvatica.csv, Trials_coords.csv and Prov_coords.cvs databases.

Subset_by_trial.R: R script to subset the original database (Fsylvatica.csv) by trial

Merge_trial_prov-coords_individualmeasurements.R:  R script to merge the coordinates of trials and provenances (Trials_coords.csv and Prov_coords.cvs) with the phenotypic measurements (Fsylvatica.csv).

Plot_Trial-Prov_locations.R: R script to map trial and provenance locations.

Hplot.R: R script to map tree height variation across provenances and trials.

Subset_by_trait.R: R script to subset the original database (Fsylvatica.csv) by trait (H, DBH, mortality, spring and autumn phenology.

Fagus_sylvatica_EUFORGEN.X: Shape files containing the distribution of Fagus sylvatica from EUFORGEN (http://www.euforgen.org)

Additional information: pdf files containing the description of the genetic trials, R scripts to check the database and COST Proceedings and related projects.

 

 

 

Files (131.1 MB)
Name Size
Additional Information.zip
md5:931bb27252bfccf9ef09a397ce4f9fba
8.4 MB Download
BeechCOSTe52_ metadata_descriptor.docx
md5:16bc213d3f5f01848ad6e94936596f00
19.8 kB Download
Fagus_sylvatica_EUFORGEN.dbf
md5:b8fb39173bd957b498160620c63a5bad
117 Bytes Download
Fagus_sylvatica_EUFORGEN.prj
md5:e4300be7f14e1fe460e30b29b7c34b9b
219 Bytes Download
Fagus_sylvatica_EUFORGEN.sbn
md5:b01356a7d2ad33ad768741f0a256c64d
132 Bytes Download
Fagus_sylvatica_EUFORGEN.sbx
md5:b0fdc678c52274abcd1451fc4404a16e
116 Bytes Download
Fagus_sylvatica_EUFORGEN.shp
md5:5a7a87db61475ea49188bff751f2a550
1.2 MB Download
Fagus_sylvatica_EUFORGEN.shp.xml
md5:ad0fcbd5c6c5fb63f1b85b8e1843ddc0
5.8 kB Download
Fagus_sylvatica_EUFORGEN.shx
md5:325a47e3f595031fa0dbe188d6487e51
108 Bytes Download
Fsylvatica.csv
md5:85217fb239f6cca579b4d0f55e37fd73
121.4 MB Download
Hplot.R
md5:29014fd4a8617f5dafb066be7e2375ea
6.1 kB Download
merge-trial-prov-coords_individualmeasurements.R
md5:8d1ffaf1b30323adca30356abe853d36
1.4 kB Download
Plot_Trial-Prov_locations.R
md5:039f169a6ab118a6be43d4deb1c51834
5.8 kB Download
Prov_coords.csv
md5:4210eb57fef2ec70b2637e0bb2a70310
41.8 kB Download
Subset_by_trait.R
md5:342f5530c4e7d4bdd496b539b867425f
6.7 kB Download
Subset_by_trial.R
md5:0ead75afcf37e280f2a556e1800fa83a
532 Bytes Download
Trial_coords.csv
md5:5fc38d3c404ba4060b02c194ae28dad4
4.1 kB Download
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