Dataset Open Access
Poelen, Jorrit
This supplementary data publication contains:
links-globi-wd-ott.tsv.gz: aggregate list of taxon graphs from Open Tree of Life Taxonomy (OTT), GloBI and Wikidata. This tab separated two column table, describe the taxonomic identifiers (e.g., NCBI:9606) that map into OTT, GloBI and Wikidata. For instance, the line "NCBI:9689{tab}WD:Q140" indicates that wikidata links their lion (Panthera leo, https://www.wikidata.org/wiki/Q140) to NCBI's lion (Panthera leo, https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9689).
wikidata-taxon-info20171227.tsv.gz: a terse 5 column file in tab-separated format of taxon objects extracted from WikiData. (2018). Wikidata dump 2017-12-27 [Data set]. Zenodo. http://doi.org/10.5281/zenodo.1211767 . The columns contain the following:
The datasets can be recreated by scripts in https://github.com/bio-guoda/guoda-datasets/tree/master/wikidata or https://doi.org/10.5281/zenodo.1428949 .
Name | Size | |
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links-globi-wd-ott.tsv.gz
md5:b9ef1826b8994a135226511f3442f1ee |
77.6 MB | Download |
wikidata-taxon-info20171227.tsv.gz
md5:5c71baf1a0f96146731e4e1bcf00fc72 |
53.1 MB | Download |
All versions | This version | |
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Views | 199 | 199 |
Downloads | 47 | 47 |
Data volume | 2.7 GB | 2.7 GB |
Unique views | 189 | 189 |
Unique downloads | 40 | 40 |