Published March 19, 2018 | Version v1
Software Open

Supporting information for Page et al. (2018), Agricultural and Forest Meteorology

Description

Code and data to reproduce the analysis presented in:

Page GFM, Liénard JF, Pruett MJ, Moffett KB (2018). Spatiotemporal dynamics of leaf transpiration quantified with time-series thermal imaging. Agricultural and Forest Meteorology, DOI: 10.1016/j.agrformet.2018.02.023

Code and data is organized as follows:

  • leaf area measurement code along with scanned data is in directory ./data/leaf_scans/ [Matlab]
  • thermal/color imagery registration code is in directory ./registration/ [Python]
  • transient leaf energy balance model implimented for both average leaf temperature and pixel-scale data is in ./model/ [R]
  • all data is in directory ./data/ [*.csv]

An active repository of this project is maintained on Github.

Files

leaf_TIR-master.zip

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Additional details

Related works

Is supplement to
10.1016/j.agrformet.2018.02.023 (DOI)