Published January 25, 2018
| Version 1.0.0
Software
Open
RNA-seq Quantification of Alternative Polyadenylation (QAPA)
Description
RNA-seq Quantification of Alternative Polyadenylation (QAPA)
Analysis of alternative polyadenylation (APA) from RNA-seq data (human and mouse). QAPA consists of two main components:
- Extraction and annotation of 3' UTR sequences from gene models
- Calculation of relative usage of alternative 3' UTR isoforms based on transcript-level abundance
Files
qapa-v1.0.0.zip
Files
(2.9 MB)
| Name | Size | Download all |
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md5:5ef276c88e80aeefc7d46b422085ef7b
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Additional details
Related works
- Is supplement to
- https://github.com/morrislab/qapa (URL)