Published January 25, 2018
| Version v1.0.0
Software
Open
Set of scripts that was used for moss sORF work
Authors/Creators
Description
A collection of python scripts (v3.5) used for P.patens sORF discovery work (https://www.biorxiv.org/content/early/2017/11/03/213736). The corresponding MS is currently under revision and is available here: https://www.biorxiv.org/content/early/2017/11/03/213736. Scripts allow to prepare training sequence sets required for sORFfinder, parse the output fasta sORF file file to create bed file, perform dn\ds calculation, trace chages in sequence length based on BLAST results
Files
Kirovez/Scripts_sORFs_MS-v1.0.0.zip
Files
(13.4 kB)
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md5:d67438c5350b17fd9989f63be5e3c12a
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Additional details
Related works
- Is supplement to
- https://github.com/Kirovez/Scripts_sORFs_MS/tree/v1.0.0 (URL)
- www.biorxiv.org/content/early/2017/11/03/213736 (Handle)