Biodiversity Literature Repository
Published February 22, 2016 | Version v1
Journal article Restricted

Taxonomy of the Phyllotis osilae species group in Argentina; the status of the "Rata de los nogales" (Phyllotis nogalaris Thomas, 1921; Rodentia: Cricetidae)

Creators

Description

Jayat, J. Pablo, Ortiz, Pablo E., González, F. Rodrigo, D'Elía, Guillermo (2016): Taxonomy of the Phyllotis osilae species group in Argentina; the status of the "Rata de los nogales" (Phyllotis nogalaris Thomas, 1921; Rodentia: Cricetidae). Zootaxa 4083 (3): 397-417, DOI: 10.11646/zootaxa.4083.3.5

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Cites
Publication: 10.1644/10-MAMM-A-027.1 (DOI)
Publication: 10.1038/nmeth.2109 (DOI)
Publication: 10.1644/07-MAMM-A-246R1.1 (DOI)
Publication: 10.1515/MAMM.2009.034 (DOI)
Publication: 10.1016/j.mambio.2009.09.005 (DOI)
Publication: 10.1146/annurev.es.21.110190.001021 (DOI)
Publication: 10.1515/mamm.2010.067 (DOI)
Publication: 10.1186/1471-2148-4-18 (DOI)
Publication: 10.2307/3504375 (DOI)
Publication: 10.1644/1545-1542(2000)081<0037:ANFPRM>2.0.CO;2 (DOI)
Publication: 10.12933/therya-14-185 (DOI)
Publication: 10.2307/1379693 (DOI)
Publication: 10.1016/j.csda.2004.06.015 (DOI)
Publication: 10.1007/BF02338839 (DOI)
Publication: 10.1111/j.1469-7998.1977.tb03238.x (DOI)
Publication: 10.11646/zootaxa.4018.3.2 (DOI)
Publication: 10.1093/bioinformatics/btg180 (DOI)
Publication: 10.2307/1382988 (DOI)
Publication: 10.1093/molbev/mst197 (DOI)
Publication: 10.1002/zoos.201100005 (DOI)
Publication: 10.1080/00222931208693253 (DOI)
Publication: 10.1080/00222932108632625 (DOI)
Publication: 10.1093/nar/25.24.4876 (DOI)
Has part
Taxonomic treatment: 10.5281/zenodo.5658981 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/DF71B2592C38916CF8ACFC3B27657DE6 (URL)
Figure: 10.5281/zenodo.1053888 (DOI)
Figure: 10.5281/zenodo.1053890 (DOI)
Dataset: http://table.plazi.org/id/03A753C72C349179F846FDD522447D45 (URL)
Figure: 10.5281/zenodo.1053892 (DOI)
Figure: 10.5281/zenodo.1053894 (DOI)
Figure: 10.5281/zenodo.1053896 (DOI)
Figure: 10.5281/zenodo.1053898 (DOI)
Figure: 10.5281/zenodo.1053900 (DOI)
Is source of
Dataset: http://www.gbif.org/dataset/bbca077c-3a0e-44a2-ada9-dcd8a368a261 (URL)

References

  • Anderson, S. (1997) Mammals of Bolivia, taxonomy and distribution. Bulletin of the American Museum of Natural History, 231, 1-652.
  • Barquez, R.M., Diaz, M.M. & Ojeda, R.A. (2006a) Mamiferos de Argentina: sistematica y distribucion. Sociedad Argentina para el Estudio de los Mamiferos (SAREM), Mendoza, 359 pp.
  • Barquez, R.M., Ferro, L.I. & Sanchez, M.S. (2006b) Tapecomys primus (Rodentia: Cricetidae), nuevo genero y especie para la Argentina. Mastozoologia Neotropical, 13, 117-121.
  • Canon, C., D'Elia, G., Pardinas, U.F.J. & Lessa, E.P. (2010) Phylogeography of Loxodontomys micropus with comments on the alpha taxonomy of Loxodontomys (Cricetidae: Sigmodontinae). Journal of Mammalogy, 91, 1449-1458. http://dx.doi.org/10.1644/10-MAMM-A-027.1
  • Darriba, D., Taboada, G.L., Doallo, R. & Posada, D. (2012) jModelTest 2: more models, new heuristics and parallel computing. Nature Methods, 9 (8), 772. http://dx.doi.org/10.1038/nmeth.2109
  • D'Elia, G., Pardinas, U.F.J., Jayat, J.P. & Salazar-Bravo, J. (2008) Systematics of Necromys (Rodentia, Cricetidae, Sigmodontinae): species limits and groups, with comments on historical biogeography. Journal of Mammalogy, 89, 778- 790. http://dx.doi.org/10.1644/07-MAMM-A-246R1.1
  • Diaz, M.M. & Barquez, R.M. (2007) Los mamiferos silvestres de la Provincia de Jujuy, Argentina: sistematica y distribucion. In: Kelt, D.A., Lessa, E.P., Salazar-Bravo, J. & Patton, J.L. (Eds.), The Quintessential Naturalist: Honoring the Life and Legacy of Oliver P. Pearson. University of California Publications in Zoology, 134, pp. 417-578.
  • Farris, J.S. (1982) The logical basis of phylogenetic analysis. In: Platnick N. & Funk V. (Eds.), Advances in Cladistics: Proceedings of the Second Meeting of the Willi Hennig Society. New York, Columbia University Press, pp. 7-36.
  • Ferro, L.I. & Martinez, J.J. (2009) Molecular and morphometric evidence validates a chacoan species of the gray leaf-eared mice genus Graomys (Rodentia: Cricetidae: Sigmodontinae). Mammalia, 73, 265-271. http://dx.doi.org/10.1515/MAMM.2009.034
  • Ferro, L.I., Martinez, J.J. & Barquez, R.M. (2010) A new species of Phyllotis (Rodentia, Cricetidae, Sigmodontinae) from Tucuman province, Argentina. Mammalian Biology, 75, 523-537. http://dx.doi.org/10.1016/j.mambio.2009.09.005
  • Galliari, C.A., Pardinas, U.F.J. & Goin, F.J. (1996) Lista comentada de los Mamiferos de Argentina. Mastozoologia Neotropical, 3, 39-67.
  • Heinonen, S. & Bosso, A. (1994) Nuevos aportes para el conocimiento de la mastofauna del Parque Nacional Calilegua (Provincia de Jujuy, Argentina). Mastozoologia Neotropical, 1, 51-60.
  • Hammer, O., Harper, D.A.T. & Ryan, P.D. (2001) Past: Paleontological Statistics Software Package for Education and Data Analysis. Palaeontologia Electronica, 4 (1), art. 4, 1-9. Available from: http://palaeoelectronica.org/2001_1/past/ issue1_01.htm (accessed 4 June 2014)
  • Hershkovitz, P. (1962) Evolution of Neotropical cricetine rodents (Muridae) with special reference to the phyllotine group. Fieldiana Zoology, 46, 1-524.
  • James, F.C & McCulloch, Ch.E. (1990) Multivariate analysis in ecology and systematics: panacea or pandora's box? Annual Review of Ecology and Systematic, 21, 129-166. http://dx.doi.org/10.1146/annurev.es.21.110190.001021
  • Jayat, J.P., D'Elia, G., Pardinas, U.F.J., Miotti, M.D. & Ortiz, P.E. (2008a) A new species of the genus Oxymycterus (Mammalia: Rodentia: Cricetidae) from the vanishing Yungas of Argentina. Zootaxa, 1911, 31-51.
  • Jayat, J.P., D'Elia, G., Pardinas, U.F.J. & Namen, J.G. (2007) A new species of Phyllotis (Rodentia, Cricetidae, Sigmodontine) from the upper montane forest of the Yungas of northwestern Argentina. In: Kelt, D.A., Lessa, E.P., Salazar-Bravo, J. & Patton, J.L. (Eds.), The Quintessential Naturalist: Honoring the Life and Legacy of Oliver P. Pearson. California,University of California Publications in Zoology, pp. 775-798.
  • Jayat, J.P., Ortiz, P.E., Gonzalez, R., Lobo Allende, R. & Madozzo Jaen, M.C. (2011b) Mammalia, Rodentia, Sigmodontinae Wagner, 1843: New Locality records, filling gaps and geographic distribution maps from La Rioja province, northwestern Argentina. Check List, 7, 614-618.
  • Jayat, J.P., Ortiz, P.E. & Miotti, M.D. (2008b) Distribucion de sigmodontinos (Rodentia: Cricetidae) en pastizales de neblina del noroeste argentino. Acta Zoologica Mexicana (n.s.), 24, 137-177.
  • Jayat, J.P., Ortiz, P.E., Pacheco, S. & Gonzalez, R. (2011a). Distribution of sigmodontine rodents in Northwestern Argentina: main gaps in information and new records. Mammalia, 75, 53-68. http://dx.doi.org/10.1515/mamm.2010.067
  • Jayat, J.P., Ortiz, P.E., Salazar-Bravo, J., Pardinas, U.F.J. & D'Elia, G. (2010) The Akodon boliviensis species group (Rodentia: Cricetidae: Sigmodontinae) in Argentina: species limits and distribution, with the description of a new entity. Zootaxa, 2409, 1-61.
  • Jayat, J.P., Ortiz, P.E., Teta, P., Pardinas, U.F.J. & D'Elia, G. (2006) Nuevas localidades argentinas para algunos roedores sigmodontinos (Rodentia: Cricetidae). Mastozoologia Neotropical, 13, 51-67.
  • Jayat, J.P. & Pacheco, S.E. (2006) Distribucion de Necromys lactens y Phyllotis osilae (Rodentia: Cricetidae: Sigmodontinae) en el noroeste argentino: modelos predictivos basados en el concepto de nicho ecologico. Mastozoologia Neotropical, 13, 69-88.
  • Jobb, G. 2011. "Treefinder version of March 2011," Software distributed by the author at http://www.treefinder.de/ (Accessed 28 January 2011)
  • Jobb, G., Haeseler, A. & Strimmer, K. (2004) TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics. BMC Evolutionary Biology 4, 18:1-9. http://dx.doi.org/10.1186/1471-2148-4-18
  • Kramer, K.M, Monjeau, J.A., Birney, E.C. & Sikes, R.S. (1999) Phyllotis xanthopygus. Mammalian Species, 617, 1-7. http://dx.doi.org/10.2307/3504375
  • Mares, M.A., Braun, J.K., Coyner, B. & Van Den Bussche, R.A. (2008) Phylogenetic and biogeographic relationships of gerbil mice Eligmodontia (Rodentia, Cricetidae) in South America, with a description of a new species. Zootaxa, 1753, 1-33.
  • Musser, G.M. & Carleton, M.D. (2005) Superfamily Muroidea. In: Wilson, D.E. &Reeder, D.M. (Eds.), Mammal species of the world: A taxonomic and geographic reference Third ed. Johns Hopkins University Press, Baltimore, pp. 894-1531.
  • Ortiz, P.E. & Pardinas, U.F.J. (2001) Sigmodontinos (Mammalia: Rodentia) del Pleistoceno tardio del valle de Tafi (Tucuman, Argentina): taxonomia, tafonomia y reconstruccion paleoambiental. Ameghiniana, 38, 3-26.
  • Ortiz, P.E., Pardinas, U.F.J. & Steppan, S. (2000) A new fossil phyllotine (Rodentia: Muridae) from northwestern Argentina and the relationships of Reithrodon group. Journal of Mammalogy, 81, 37-51. http://dx.doi.org/10.1644/1545-1542(2000)081<0037:ANFPRM>2.0.CO;2
  • Ortiz, P.E., Jayat, J.P. & Pardinas, U.F.J. (2011) Fossil sigmodontine rodents of Northwestern Argentina: taxonomy and paleoenvironmental meaning. In: Salfity, J.A. & Marquillas, R.A. (Eds.), Cenozoic Geology of the Central Andes of Argentina. SCS Publisher, Salta, Argentina, pp. 301-316.
  • Osgood, W.H. (1944) Nine new South American rodents. Field Museum of Natural History, Zoology series, 29, 191-204.
  • Pacheco,V., Rengifo, E.M. & Vivas, D. (2014) A new species of Leaf-eared Mouse, genus Phyllotis Waterhouse, 1837 (Rodentia: Cricetidae) from northern Peru. Therya, 5 (2), 481-508. http://dx.doi.org/10.12933/therya-14-185
  • Pardinas, U.F.J., Teta, P., D'Elia, G., Cirignoli, S. & Ortiz, P.E. (2007) Resolution of some problematic type localities for sigmodontine rodents (Cricetidae, Sigmodontinae). In: Kelt, D.A., Lessa, E.P., Salazar-Bravo, J. & Patton, J.L. (Eds.), The Quintessential Naturalist: Honoring the Life and Legacy of Oliver P. Pearson. California, University of California Publications in Zoology, pp. 391-416.
  • Patton, J.L., Pardinas, U.F.J. & D'Elia, G. (2015) Mammals of South America, Volume 2, Rodents. The University of Chicago Press, Chicago and London, 1290 pp.
  • Pearson, O.P. (1958) A taxonomic revision of the rodent genus Phyllotis. University of California Publications in Zoology, 56, 391-496.
  • Pearson, O.P. & Patton, J.L. (1976) Relationships among South American phyllotine rodents based on chromosome analysis. Journal of Mammalogy, 57, 339-350. http://dx.doi.org/10.2307/1379693
  • Peres-Neto, P.R., Jackson, D.A. & Somers, K.M. (2005) How many principal components? Stopping rules for determining the number of non-trivial axes revisited. Computational Statistics & Data Analysis, 49, 974-997. http://dx.doi.org/10.1016/j.csda.2004.06.015
  • Rannala, B. & Yang, Z. (1996) Probability distribution of molecular evolutionary trees: A new method of phylogenetic inference. Journal of Molecular Evolution, 43, 304-311. http://dx.doi.org/10.1007/BF02338839
  • Reig, O.A. (1977) A proposed unified nomenclature for the enamelled components of the molar teeth of the Cricetidae (Rodentia). Journal of Zoology, London, 181, 227-241. http://dx.doi.org/10.1111/j.1469-7998.1977.tb03238.x
  • Rengifo, E.M. & Pacheco, V. (2015) Taxonomic revision of the Andean leaf-eared mouse, Phyllotis andium Thomas 1912 (Rodentia: Cricetidae), with the description of a new species. Zootaxa, 4018, 349-380. http://dx.doi.org/10.11646/zootaxa.4018.3.2
  • Ronquist, F. & Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574. http://dx.doi.org/10.1093/bioinformatics/btg180
  • Spotorno, A.E. & Walker, L.I. (1983) Analisis electroforetico y biometrico de dos especies de Phyllotis en Chile central y sus hibridos experimentales. Revista Chilena de Historia Natural, 56, 51-59.
  • Steppan, S.J. (1998) Phylogenetic relationships and species limits within Phyllotis (Rodentia: Sigmodontinae): concordance between mtDNA sequence and morphology. Journal of Mammalogy, 79, 573-593. http://dx.doi.org/10.2307/1382988
  • Steppan, S.J., Ramirez, O., Banbury, J., Huchon, D., Pacheco, V., Walker, L.I. & Spotorno, A.E. (2007) A molecular reappraisal of the systematics of the leaf-eared mice Phyllotis and their relatives. In: Kelt, D.A., Lessa, E.P., Salazar-Bravo, J. & Patton, J.L. (Eds.), The Quintessential Naturalist: Honoring the Life and Legacy of Oliver P. Pearson. California: University of California Publications in Zoology, pp. 799-826.
  • Tamura K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Molecular Biology and Evolution 30, 2725-2729. http://dx.doi.org/10.1093/molbev/mst197
  • Teta, P., Pardinas U.F.J., D'Elia, G., Jayat, J.P. & Ortiz, P.E. (2011) Phylogenetic position and morphology of Abrothrix illutea Thomas, 1925, with comments on the incongruence between gene trees of Abrothrix (Rodentia, Cricetidae) and their implications for the delimitation of the genus. Zoosystematics and Evolution, 87, 227-241. http://dx.doi.org/10.1002/zoos.201100005
  • Thomas, O. (1912) New bats and rodents from S. America. Annals and Magazine of Natural History, 8, ser. 10, 403-411. http://dx.doi.org/10.1080/00222931208693253
  • Thomas, O. (1921) On a further collection of mammals from Jujuy obtained by Sr. E. Budin. Annals and Magazine of Natural History, 8, ser. 9, 608-617. http://dx.doi.org/10.1080/00222932108632625
  • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. & Higgins, D.G. (1997) The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Researches, 24, 4876-4882. http://dx.doi.org/10.1093/nar/25.24.4876
  • Voss, R.S. (1988) Systematics and ecology of Ichthyomyine rodents (Muroidea): patterns of morphological evolution in a small adaptative radiation. Bulletin of the American Museum of Natural History, 2, 259-493.
  • Wahlert, J. (1985) Cranial foramina of rodents. In: Luckett, W.P. & Hartenberger, J.L. (Eds.), Evolutionary relationships among rodents: a multidisciplinary analysis. Plenum Press, New York, pp. 311-332.