F1000Research
Published June 11, 2014 | Version v1
Dataset Open

Training data of protein classifier SolubEcoli.pgc and GDP1.pgc

Creators

  • 1. GNR Knowledge Centre for Genome Informatics, Institute of Genomics and Integrative Biology, India/University of Pune
  • 2. GNR Knowledge Centre for Genome Informatics, Institute of Genomics and Integrative Biology
  • 3. Maitreyi College, India
  • 4. University of Delhi, India

Description

The classifiers Solub.Ecoli.pgc and GDP1.pgc have been built using Pro-Gyan (https://code.google.com/p/pro-gyan/).

The file AGGREGATING.fasta contains chaperone-dependent 502 aggregation prone proteins from E.coli. The file SOLUBLE.fasta contains chaperone-independent 475 soluble proteins from E.coli. The file GROEL_C3.fasta contains GroEL-dependent 83 "class 3" proteins from E.coli. The file SOLUBLE.fasta contains chaperone-independent 475 soluble proteins from E.coli.

Files

GDP1_data.zip

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