GMOD/Apollo: Apollo2.0.8-RC2(JB#d3827c)
Creators
- 1. Lawrence Berkeley National Lab
- 2. Lawrence Berkeley National Laboratory
- 3. @BackofenLab
- 4. BIPAA/GenOuest
- 5. National Taiwan University-Graduate Institute of Biomedical Electronics and Bioinformatics
- 6. OHSU Computational Biology Department
- 7. UC Berkeley
- 8. Gitter
- 9. Uni of Cambridge / PomBase
Description
Release Candidate 2
Apollo 2.0.8-RC2
Some of the new features include:
- added ability to annotate canvas BAM tracks
- expanded track services
- support for indexed FASTA as a reference sequence
Some important bug fixes:
- numerous fixes to track web services
- fixed numerous build issues
Note You will need to install node 6 or better.
Note If updating your jbrowse settings from previous versions in apollo-config.groovy you will need to set the JBrowse to use the currently tagged version or better. If this is commented out, however, the default will work.
The complete change log can be found at: https://github.com/GMOD/Apollo/blob/master/ChangeLog.md
Please review the documentation pages for more details: http://genomearchitect.readthedocs.io/en/stable/
Note: You can find a guide upgrading existing Apollo installations here: http://genomearchitect.readthedocs.io/en/stable/Migration.html
Please open a GitHub issue if you find any problems: https://github.com/GMOD/Apollo/issues/
Active mailing list (apollo@lists.lbl.gov) and archive.
Files
GMOD/Apollo-2.0.8-RC2.zip
Files
(88.8 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/GMOD/Apollo/tree/2.0.8-RC2 (URL)