Published June 4, 2020 | Version v1
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Diffraction images of a crystal of the F-BAR domain of PSTPIP1 (Proline-serine-threonine phosphatase-interacting protein 1) bound to the C-terminal homology (CTH) segment of the phosphatase LYP (PTPN22) (PDB entry 7AAM)

  • 1. Instituto de Biología Molecular y Celular del Cancer, Consejo Superior de Investigaciones Científicas, University of Salamanca, 37007 Salamanca, Spain
  • 2. Instituto de Biología y Genética Molecular (IBGM), Consejo Superior de Investigaciones Científicas-Universidad de Valladolid, c/ Sanz y Forés 3, 47003 Valladolid, Spain

Description

Diffraction images of a crystal of the F-BAR domain of human PSTPIP1 (residues 1-289, Uniprot reference O43586-1) in complex with the CTH of LYP (residues 787-807, Uniprot Q9Y2R2-1).

Data were collected on a single crystal at the beamline i03 of the Diamond Light Source synchrotron (Didcot, UK) using radiation of 0.99987 Å wavelength and a PILATUS3 6M detector. The dataset consists of 3 groups, each containing of 1800 images (0.1 degree oscillation per image), collected at three different positions of the same crystal. Crystal belongs to the space group P2(1)2(1)2(1) with unit cell dimensions a=48.0 Å, b=72.0 Å, c=205.0 Å. The asymmetric unit contains an homodimer of the F-BAR domain bound to a LYP-CTH (~53% solvent content), which is the biological complex.

Diffraction data was notably anisotropic. The lowest resolution limit was 4.05 Å in the direction b* and the highest limits were 2.11 Å and 2.10 in the directions a* and c*, respectively.

 

The structure derived form these data is published in:

Manso, J.A., Marcos, T., Ruiz-Martín, V. Casas J, Alcón P, Sánchez Crespo M, Bayón Y, de Pereda JM, Alonso A PSTPIP1-LYP phosphatase interaction: structural basis and implications for autoinflammatory disorders. Cell. Mol. Life Sci. 79, 131 (2022). https://doi.org/10.1007/s00018-022-04173-w

The structure is available at the PDB under the code 7AAM:

https://www.ebi.ac.uk/pdbe/entry/pdb/7aam

Notes

We thank Diamond Light Source for providing access to synchrotron radiation facility and the team of the macromolecular crystallography beamlines for assistance.

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Additional details

Related works

Is supplement to
Dataset: 10.2210/pdb7AAM/pdb (DOI)
Is supplemented by
Journal article: 10.1007/s00018-022-04173-w (DOI)