Published September 26, 2025 | Version lodei_v1.1.0
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rna-editing1/lodei: lodei v1.1.0

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Description

LoDEI v1.1.0 release notes:

  • lodei find now supports the analysis of paired-end reads out-of-the box.
    • added support for ISR and ISF library types (see https://salmon.readthedocs.io/en/latest/library_type.html for description of library types)
  • lodei find creates (if needed) missing .bai files for the provided input .bam files
  • Added QC plot lodei plotwindowcounts displaying the number of windows for a differential editing signals versus the differential editing signal for a better understanding of the underlying data.
  • Added metagene plot lodei plotmetagene visualizing the number of detected, significant windows or the summed signal strength of significant windows for a given set of genomic locations.

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rna-editing1/lodei-lodei_v1.1.0.zip

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