Published September 26, 2025
| Version lodei_v1.1.0
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Open
rna-editing1/lodei: lodei v1.1.0
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Description
LoDEI v1.1.0 release notes:
lodei find
now supports the analysis of paired-end reads out-of-the box.- added support for ISR and ISF library types (see https://salmon.readthedocs.io/en/latest/library_type.html for description of library types)
lodei find
creates (if needed) missing.bai
files for the provided input.bam
files- Added QC plot
lodei plotwindowcounts
displaying the number of windows for a differential editing signals versus the differential editing signal for a better understanding of the underlying data. - Added metagene plot
lodei plotmetagene
visualizing the number of detected, significant windows or the summed signal strength of significant windows for a given set of genomic locations.
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rna-editing1/lodei-lodei_v1.1.0.zip
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(45.8 kB)
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Additional details
Related works
- Is supplement to
- Software: https://github.com/rna-editing1/lodei/tree/lodei_v1.1.0 (URL)
Software
- Repository URL
- https://github.com/rna-editing1/lodei