Published July 28, 2024 | Version v0.2.0
Software Open

3254c/DeepKINET: DeepKINET v0.2.0

  • 1. Nagoya University Hospital

Description

DeepKINET (A Deep Generative Model with Single Cell RNA Kinetics)

DeepKINET is a deep generative model to estimate mRNA kinetic rates at the single-cell level.

v0.2.0(add batch effect removal for VAE)

Teppei Shimamura's lab, Tokyo Medical and Dental university at Tokyo and Nagoya University at Nagoya

Yasuhiro Kojima's lab, National Cancer Center Research Institute at Tokyo

Developed by Chikara Mizukoshi

Files

3254c/DeepKINET-v0.2.0.zip

Files (3.1 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/3254c/DeepKINET/tree/v0.2.0 (URL)