wmglab-duke/ascent: ASCENT v1.3.1

DOI: 10.5281/zenodo.10791676

ASCENT v1.3.1 Release Notes

v1.3.0 -> v1.3.1: new features

• moved FiberZMode from model.json into sim.json
• added "EXPLICIT" FiberZMode to model explicitly provided 3D fiber coordinates
• added "EXPLICIT_3D" FiberXYMode to pair with the explicit FiberZMode when modeling explicit 3D fiber coordinates
• added 3D plotting function to visualize 3D fibers within fascicles/nerve
• added pop-up plots for when invalid fibers are detected

v1.3.0 -> v1.3.1: docs

• added documentation for the new JSON configuration properties used for modeling user-defined 3D explicit fibers and included explicit_3D template example file
• added DOI information for new papers using ASCENT
• added cuff parameter descriptions to the ImThera_flip_100.json cuff preset
• added documentation for implementations of clinically used cuff electrodes (Cuff Sources)
• updated documentation for dataset generation tool

v1.3.0 -> v1.3.1: bug fixes

• fixed error when importing from ascent's classes in analysis scripts by adding root directory to sys.path
• fixed error when unpacking a sim object's potentials_product attribute that does not contain any active recording cuffs

v1.3.0 -> v1.3.1: miscellaneous

• upgraded to Python 3.10 for windows install
• added nd_line python package to required package dependencies in requirements.txt