Published November 21, 2023 | Version v0.18.1
Software Open

TRON-Bioinformatics/covigator-ngs-pipeline: v0.18.1

Creators

  • 1. @TRON-Bioinformatics

Description

What's Changed

  • Restored conda compatibility with newer nextflow versions by @johausmann in https://github.com/TRON-Bioinformatics/covigator-ngs-pipeline/pull/53
  • Implemented a pipeline mode to perform only the steps for lineage determination or genome generation @johausmann in https://github.com/TRON-Bioinformatics/covigator-ngs-pipeline/pull/54
  • Added mamba support and update pangolin lineage determination by @johausmann in https://github.com/TRON-Bioinformatics/covigator-ngs-pipeline/pull/61

Full Changelog: https://github.com/TRON-Bioinformatics/covigator-ngs-pipeline/compare/v0.18.0...v0.18.1

Files

TRON-Bioinformatics/covigator-ngs-pipeline-v0.18.1.zip

Files (1.3 MB)

Additional details

Related works

Is supplement to
Software: https://github.com/TRON-Bioinformatics/covigator-ngs-pipeline/tree/v0.18.1 (URL)