Published August 15, 2017 | Version v1

Supplementary code for "Automated adjoints of coupled PDE-ODE systems"

  • 1. University of Oxford
  • 2. Simula Research Laboratory

Description

This file contains supplementary code for the paper "Automated
adjoints of coupled PDE-ODE systems" by P. E. Farrell, J. E. Hake,
S. W. Funke and M. E. Rognes.

This research is supported by a Center of Excellence grant awarded to
the Center for Biomedical Computing at Simula Research Laboratory from
the Research Council of Norway, by EPSRC grants EP/K030930/1 and
EP/M011151/1, a NOTUR grant NN9316K and the generous support of Sir
Michael Moritz and Harriet Heyman.

The code relies on a working installation of the FEniCS and
dolfin-adjoint softwares and the cbcbeat module, all available in the
public domain:
- FEniCS: www.fenicsproject.org, version 2017.1 (or later perhaps)
- dolfin-adjoint: www.dolfin-adjoint.org, version compatible with the above
- cbcbeat: www.bitbucket.org/meg/cbcbeat, version compatible with the abov

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