Published October 4, 2023 | Version 1
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rCRUX Generated Leray CO1-combined Reference Database

Authors/Creators

  • 1. Vermont Biomedical Research Network
  • 2. NOAA PMEL
  • 3. Landmark College
  • 4. Departamento de Biología, Universidad Autónoma de Madrid, Cantoblanco, Madrid -, Spain

Description

rCRUX generated by combining and de-replicating the following databases: 

Leray CO1-ncbi-mitochondrial (https://doi.org/10.5281/zenodo.8407603)

Leray CO1-embl (https://doi.org/10.5281/zenodo.8407606)

Leray CO1-searchterm (https://doi.org/10.5281/zenodo.8407620)

 

Primer Name:  Leray CO1
Gene:   CO1
Length of Target:    ~313
Forward Sequence (5'-3'):   GGWACWGGWTGAACWGTWTAYCCYCC
Reverse Sequence (5'-3'):    TANACYTCnGGRTGNCCRAARAAYCA
Reference:   Leray, M., Yang, J. Y., Meyer, C. P., Mills, S. C., Agudelo, N., Ranwez, V., ... & Machida, R. J. (2013). A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents. Frontiers in zoology, 10(1), 34.

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