Published October 3, 2023
| Version 1.0.1
Software
Open
akikuno/cstag: 1.0.1
Description
- [x] Made changes in
consensusto not considerNdue to insufficient read numbers.
cs_tags = [
'=A*cg=G+aa=T-ac=G',
'*cg=G+aa=T-ac=G',
'=G-t=ACG'
]
positions = [10, 11, 12]
cstag.consensus(cs_tags, positions)
# result: =N*cg=G+aa=T-ac=G
# expected: =A*cg=G+aa=T-ac=G
- [x] Modified
consensusto split the deletion tags.- Added
expand_deletion_tagsto split the deletions.
- Added
cs_tags = [
'=A*cg=G+aa=T-ac=G',
'*cg=G+aa=T-ac=G',
'=G-t=ACG'
]
positions = [10, 11, 12]
cstag.consensus(cs_tags, positions)
# result: =N*cg=G+aa=T-ac=GN
# expected: =N*cg=G+aa=T-ac=G
- [x] Tried other libraries as installing weasyprint is challenging on mac and windows. However, continued using weasyprint as CSS was not applied.
- fpdf2
- borb
- xhtml2pdf
Files
akikuno/cstag-1.0.1.zip
Files
(1.0 MB)
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|---|---|---|
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md5:8d84871467cc4b7f447b6e4b3c32371d
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Additional details
Related works
- Is supplement to
- https://github.com/akikuno/cstag/tree/1.0.1 (URL)