Published March 2, 2022
| Version 0.4.0
Software
Open
TRON-Bioinformatics/splice2neo: Release 0.4.0
Authors/Creators
Description
This release covers:
- Leafcutterr: The strand information while leafcutter parsing is now retrieved from the cluster id in the count table.
- Spladder: previous code changes missed to consider the event type in generation of the junc id for alternative splice sites. This is fixed now.
- More tests were added
- An old bug in spladder_transform_mutex_exon was fixed
- Until now a junc_id could appear multiple times if it could be part of multiple events. As we are not interested in re-constructing the events, now unique junc_ids will be returned.
Files
TRON-Bioinformatics/splice2neo-0.4.0.zip
Files
(370.7 kB)
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Additional details
Related works
- Is supplement to
- https://github.com/TRON-Bioinformatics/splice2neo/tree/0.4.0 (URL)