Published September 18, 2023
| Version v1
Journal article
Open
Data from: Reference genome choice and filtering thresholds jointly influence phylogenomic analyses
Authors/Creators
- 1. University of Arizona
- 2. Tarleton State University
- 3. Michigan State University
- 4. Iowa State University
- 5. University of Wyoming
Description
Scripts and simulated data associated with the manuscript "Reference genome choice and filtering thresholds jointly influence phylogenetic analyses". Scripts can also be found at https://github.com/jessicarick/refbias_scripts, but were archived here at the time of manuscript submission.
refbias_scripts-preprint.tar.gz contains scripts from GitHub repository
simphy_trees.tar.gz contains simulated species trees
sim_results_raxml_astral.tar.gz contains trees and tree statistics for simulation analyses
emp_results_raxml_astral.tar.gz contains trees and tree statistics for empirical analyses
simulation_vcfs.tar.gz contains filtered VCFs that were used for inferring phylogenies
Files
refbias_scripts-master_sysbio_revision.zip
Files
(11.2 GB)
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