Published September 12, 2023
| Version 1.5
Dataset
Open
geNomad database
Description
Marker database used by geNomad for virus and plasmid identification.
- genomad_db_v1.5.tar.gz: MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's VMR number 19.
- genomad_hmm_v1.5.tar.gz: HMMER HMM models.
- genomad_metadata_v1.5.tsv.gz: Metadata for all the 227,897 markers.
- genomad_msa_v1.5.tar.gz: Multiple sequence alignments in FASTA format.
Files
Files
(5.1 GB)
| Name | Size | Download all |
|---|---|---|
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md5:20dcfac8cec3348bf31c751f537d4b02
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849.4 MB | Download |
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md5:3d7b981d35a5567949ce70a81c692b4c
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3.5 GB | Download |
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md5:28b361ca36f0d662d89f2fb8f78c040d
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6.8 MB | Download |
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md5:446b3ffc99407b029202b45d72170143
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694.9 MB | Download |