Repeat catalogs for TRGT

This dataset contains various repeat catalogs for the Tandem Repeat Genotyping Tool (TRGT):

• pathogenic_repeats.hg38.bed contains annotations of 56 known pathogenic repeats.
• polymorphic_repeats.hg38.bed contains 171,146 polymorphic repeats. The original version of this catalog was made for short reads and is distributed under CC BY-SA 4.0 license.
• adotto_repeats.hg38.bed contains 937,122 repeats originally released by the Genome in a Bottle tandem repeat benchmarking project 10.5281/zenodo.7226352.
• adotto_hprc.tdb.tar is a TRGTdb file containing alleles of repeats from the adotto_repeats.hg38.bed catalog across 100 HPRC samples.

Please consider citing TRGT preprint if you are using these data.