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Published August 21, 2023 | Version v1
Dataset Open

Pharokka Database v1.4.0

Creators

  • 1. University of Adelaide

Description

This holds the databases for Pharokka v1.4.0 (https://github.com/gbouras13/pharokka) 

It includes the PHROGs database made with MMSeqs2 (v13.45111) and Pyhmmer (v0.9.0 - .h3m file of all 38880 PHROGs), along with MMseqs2 compatible versions of the CARD v3.2.7 and VFDB (as of August 18 2023) databases.

It also includes the INPHARED mash sketch and annotation file as of 1 August 2023 (https://github.com/RyanCook94/inphared). 

Files

Files (576.3 MB)

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md5:cd9cc60dfaa2de63ec23902ab6d5b9d7
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