Published August 10, 2023
| Version 0.1.0
Technical note
Open
Genotype differentiation of highly pathogenic avian influenza viruses (HPAIV) of the goose/Guangdong lineage in Germany - Derivation and deployment of reference sequences
Creators
- 1. Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health (FLI)
Description
Highly pathogenic avian influenza viruses (HPAIV) of the H5 goose/Guangdong (gs/GD) lineage have repeatedly emerged in Germany since 2006. Rooted in the respective gs/GD lineages, HPAIV in Germany have genetically diversified into a plethora of clades and subclades and evolved into an assortment of sub- and genotypes. This technical note summarizes the genotype differentiation procedure, lists the successfully assigned genotypes and supplies corresponding reference sequences.
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