Published August 3, 2023 | Version v1

Studies in Hygrocybe s.l. (Hygrocyboideae, Hygrophoraceae) in Brazil: New species of Humidicutis and Neohygrocybe

  • 1. Divisão do Curso de Pós-graduação em Botânica, Instituto Nacional de Pesquisas da Amazônia (INPA), Av. André Araújo 2936, 69067-375, Manaus, AM, Brazil & jul3asc@gmail.com; https://orcid.org/0000-0003-2795-7067
  • 2. Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks Street, Toronto, ON M5S 3B2, Canada & Department of Natural History, Royal Ontario Museum, 100 Queens Park, Toronto, ON M5S 2C6, Canada & jeanmarcm@gmail.com; https://orcid.org/0000-0003-4011-1381
  • 3. Department of Plant Pathology and Odum School of Ecology, University of Georgia, Athens, GA 30602, United States & dlodgester@gmail.com; https://orcid.org/0000-0003-4807-348X
  • 4. Department of Natural History, Royal Ontario Museum, 100 Queens Park, Toronto, ON M5S 2C6, Canada & margaritescu.simona@gmail.com; https://orcid.org/0000-0001-5560-8847
  • 5. Graduate Program in Biology of Fungi, Federal University of Santa Catarina (UFSC), Campus Universitário Reitor João David Ferreira Lima, s/n, 88040-900, Florianopolis, Brazil & maliceneves@gmail.com; https://orcid.org/0000-0002-1810-4890
  • 6. Divisão do Curso de Pós-graduação em Botânica, Instituto Nacional de Pesquisas da Amazônia (INPA), Av. André Araújo 2936, 69067-375, Manaus, AM, Brazil & oliveira.j.j.s.86@gmail.com; https://orcid.org/0000-0001-6643-3421

Description

Cardoso, Juli Simon, Moncalvo, Jean-Marc, Lodge, D. Jean, Margaritescu, Simona, Neves, Maria Alice, Oliveira, Jadson J. S. (2023): Studies in Hygrocybe s.l. (Hygrocyboideae, Hygrophoraceae) in Brazil: New species of Humidicutis and Neohygrocybe. Phytotaxa 607 (1): 57-71, DOI: 10.11646/phytotaxa.607.1.5, URL: http://dx.doi.org/10.11646/phytotaxa.607.1.5

Files

Restricted

The record is publicly accessible, but files are restricted. <a href="https://zenodo.org/account/settings/login?next=https://zenodo.org/records/8212211">Log in</a> to check if you have access.

Linked records

Additional details

Identifiers

References

  • Boertmann, D. (2010) The genus Hygrocybe: Fungi of Northern Europe, vol. 1. 2nd ed. The Danish Mycological Society, Denmark. 184 pp.
  • Bon, M. (1989) Nouveaux taxons (Hygrophoraceae). Documents Mycologiques 75: 55-56.
  • Bresinsky, A. (2008) Die Gattungen Hydropus bis Hypsizygus mit Angaben zur Okologie und Verbreitung der Arten. Regensburger Mykologische Schriften 15: 1-304.
  • Cantrell, S.A. & Lodge, D.J. (2004) Hygrophoraceae (Agaricales) of the Greater Antilles: Hygrocybe subgenus Pseudohygrocybe sections Coccineae and Neohygrocybe. Mycological Research 108 (11): 1301-1314. https://doi.org/10.1017/S0953756204001029
  • Darriba, D., Posada, D., Kozlov, A.M., Stamatakis, A., Morel, B. & Flouri, T. (2020) ModelTest-NG: a new and scalable tool for the selection of DNA and protein evolutionary models. Molecular biology and evolution 37 (1): 291-294. https://doi.org/10.1093/molbev/msz189
  • Dennis, R.W.G. (1953) Some West Indian collections referred to Hygrophorus Fr. Kew Bulletin 8: 253-268. https://doi.org/10.2307/4109307
  • Dentinger, B.T.M., Margaritescu, S. & Moncalvo, J.M. (2010) Rapid and reliable high-throughput methods of DNA extraction for use in barcoding and molecular systematics of mushrooms. Molecular Ecology Resources 10 (4): 628-633. https://doi.org/10.1111/j.1755-0998.2009.02825.x
  • Edgar, R.C. (2004) MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5: 113. https://doi.org/10.1186/1471-2105-5-113
  • Fries, E.M. (1836) Corpus Florarum provincialium Sueciae 1. Floram Scanicam. Typis Palmblad, Sebell & Company, Uppsala, Sweden. 394 pp. https://doi.org/10.5962/bhl.title.47083
  • Fries, E.M. (1838) Epicrisis systematis mycologici seu synopsis Hymenomycetum. Uppsala, Sweden. 610 pp.
  • Fuljer, F., Zajac, M., Boertmann, D., Szaboova, D. & Kautmanova, I. (2022) Neohygrocybe pseudoingrata, a new grassland species from Slovakia and the Czech Republic. Fungal Systematics and Evolution 9 (1): 11-17. https://doi.org/10.3114/fuse.2022.09.02
  • Gardes, M. & Bruns, T.D. (1993) ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Molecular Ecology 2: 113-118. https://doi.org/10.1111/j.1365-294X.1993.tb00005.x
  • He, M.-Q., Zhao, R.-L., Hyde, K.D., Begerow, D., Kemler, M., Yurkov, A., McKenzie, E.H.C., Raspe, O., Kakishima, M., Sanchez-Ramirez, S., Vellinga, E.C., Halling, R., Papp, V., Zmitrovich, I.V., Buyck, B., Ertz, D., Wijayawardene, N.N., Cui, B.-K., Schoutteten, N., Liu, X.-Z., Li, T.-H., Yao, Y.-J., Zhu, X.-Y., Liu, A.-Q., Li, G.-J., Zhang, M.-Z., Ling, Z.-L., Cao, B., Antonin, V., Boekhout, T., Da Silva, B.D.B., De Crop, E., Decock, C., Dima, B., Dutta, A.K., Fell, J.W., Geml, J., Ghobad-Nejhad, M., Giachini, A.J., Gibertoni, T.B., Gorjon, S.P., Haelewaters, D., He, S.-H., Hodkinson, B.P., Horak, E., Hoshino, T., Justo, A., Lim, Y.W., Menolli Jr., N., Mesici, A., Moncalvo, J.-M., Mueller, G.M., Nagy, L.G., Nilsson, R.H., Noordeloos, M., Nuytinck, J., Orihara, T., Ratchadawan, C., Rajchenberg, M., Silva- Filho, A.G.S., Sulzbacher, M.A., Tkalcˇec, Z., Valenzuela, R., Verbeken, A., Vizzini, A., Wartchow, F., Wei, T.-Z., Weiss, M., Zhao, C.-L. & Kirk, P.M. (2019) Notes, outline and divergence times of Basidiomycota. Fungal Diversity 99: 105-367. https://doi.org/10.1007/s13225-019-00435-4
  • Herink, J. (1959) Species familieae Hygrophoracearum. (Stavnatkovite houby parhorku "Velka Horka" u Mnichova Hradiste). Sbornik Severoceskeho Musea 1: 53-86.
  • Hesler, L.R. & Smith, A.H. (1963) North American species of Hygrophorus. University of Tennessee Press, Knoxville. 416 pp. https://doi.org/10.5962/bhl.title.61976
  • Horak, E. (1979) Fungi, basidiomycetes Agaricales y Gasteromycetes secotioides. Flora Criptogamica de Tierra del Fuego (Buenos Aires) 11 (6): 1-524.
  • Horak, E. (1990) Monograph of the New Zealand Hygrophoraceae (Agaricales). New Zealand Journal of Botany 28 (3): 255-309. https://doi.org/10.1080/0028825X.1990.10412313
  • Kramer, L.A. (2004) The Online Auction Color Chart. Stanford, Online Auction Color Chart Company, USA. 6 pp.
  • Kummer, P. (1871) Der F¸hrer in die Pilzkunde. C. Luppe, Zerbst, Germany. 146 pp.
  • Largent, D.L. (1986) How to Identify Mushrooms to Genus I: Macroscopic features. 3ed. Mad River Press Inc., Eureka, CA, USA. 166 pp.
  • Largent, D.L., Johnson, D. & Watling, R. (1977) How to Identify Mushrooms to Genus III: Microscopic features. 3ed. Mad River Press Inc., Eureka, CA, USA. 148 pp.
  • Leelavathy, K.M., Manimohan, P. & Arnolds, E.J.M. (2006) Hygrocybe in Kerala State, India. Persoonia -Molecular Phylogeny and Evolution of Fungi 19 (1): 101-151.
  • Lodge, D.J. & Pegler, D.N. (1990) The Hygrophoraceae of the Luquillo Mountains of Puerto Rico. Mycological Research, 94: 443-456. https://doi.org/10.1016/S0953-7562(10)80002-4
  • Lodge, D.J., Padamsee, M., Matheny, P.B., Aime, M.C., Cantrell, S.A., Boertmann, D., Kovalenko, A., Vizzini, A., Dentinger, B.T.M., Kirk, P.M., Ainsworth, A.M., Moncalvo, J.- M., Vilgalys, R., Larsson, E., Lucking, R., Griffith, G.W., Smith, M.E., Norvell, L.L., Desjardin, D.E., Redhead, S.A., Ovrebo, C.L., Lickey, E.B., Ercole, E., Hughes, K.W., Courtecuisse, R., Young, A., Binder, M., Minnis, A.M., Lindner, D.L., Ortiz-Santana, B., Haight, J., Laessoe, T., Baroni, T.J., Geml, J. & Hattori, T. (2013) Molecular phylogeny, morphology, pigment chemistry and ecology in Hygrophoraceae (Agaricales). Fungal Diversity 64: 1-99. https://doi.org/10.1007/s13225-013-0259-0
  • Lotsy, J.P. (1907) Vortrage fiber botanische Stammensgeschichte, gehalten an der Reichsuniversitat zu Leiden. Algen und Pilzen, vol. I. G. Fischer, Jena, Germany. 828 pp. https://doi.org/10.5962/bhl.title.33103
  • Malloch, D. (2010) Fleshy fungi Basidiomycota of the Atlantic Maritime Ecozone. In: McAlpine, D.F. & Smith, I.M. Assessment of Species Diversity in the Atlantic Maritime Ecozone. NRC Research Press, Canada. pp. 107-152.
  • Murrill, W.A. (1914) Illustrations of fungi. XVII. Mycologia 6 (1): 1-4. https://doi.org/10.1080/00275514.1914.12020942
  • Pegler, D.N. (1977) A preliminary Agaric flora of East Africa. Kew Bulletin Additional Series 6: 1-615.
  • Pegler, D.N. (1983) Agaric flora of the Lesser Antilles. Kew Bulletin Adititional Series 9. [HMSO, London]
  • Pires, J.M. & Prance, G.T. (1985) The Vegetation Types of the Brazilian Amazon. In Prance, G.T. & Lovejoy, T.E. (eds.) Key environments: Amazonia. Pergamon Press, Oxford. pp. 109-145.
  • Rambaut, A. (2007) FigTree v1.4.3. Institute of Evolutionary Biology, University of Edinburgh, Edinburgh. Available from: http://tree.bio. ed.ac.uk/software/figtree/ (accessed 2 August 2023)
  • Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D., Darling, A., H ˆ hna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542. https://doi.org/10.1093/sysbio/sys029
  • Singer, R. (1955) Type studies on basidiomycetes. VIII. Sydowia 9 (1-6): 367-431.
  • Singer, R. (1958) Fungi Mexicana, Series Segunda - Agaricales. Sydowia 12: 221-243.
  • Stamatakis, S. (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. https://doi.org/10.1093/bioinformatics/btl446
  • Valenzuela, R., Guzman, G. & Castillo, J. (1981) Descripciones de especies de macromicetos poco conocidas en Mexico, con discusiones sobre su ecologia y distribucion. Scientia Fungorum 15: 67-120.
  • Vizzini,A. & Ercole, E. (2012) [2011] Considerations on the genus Hygrocybe s. lato: the new genus Dermolomopsis and new combinations in Chromosera. Micologia e Vegetazione Mediterrane 26 (2): 91-106.
  • Wang, C.-Q., Zhang, M., Li, T.-H., Liang, X.-S. & Shen, Y.-H. (2018) Additions to tribe Chromosereae (Basidiomycota, Hygrophoraceae) from China, including Sinohygrocybe gen. nov. and a first report of Gloioxanthomyces nitidus. MycoKeys 38: 59-76. https://doi.org/10.3897/mycokeys.38.25427
  • White, T.J., Bruns, T., Lee, S. & Taylor, J.W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. & White, T.J. (eds.) PCR protocols: a guide to methods and applications. Academic Press, New York, pp. 315-322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
  • Young, A.M. (2005) Fungi of Australia: Hygrophoraceae. CSIRO Publishing, Australian Biological Resources Study, Canberra.
  • Young, A.M. & Syme, K. (2007) A new green species of Humidicutis from Western Australia. Australasian Mycologist 26 (2-3): 71-74.
  • Young, A.M. & Wood, A.E. (1997) Studies on the Hygrophoraceae (Fungi, Homobasidiomycetes, Agaricales) of Australia. Australian Systematic Botany 10 (6): 911-1030. https://doi.org/10.1071/SB96005