Published July 26, 2023 | Version 0.0.5

An assessment of acd_lotus for the structural dereplication of natural products using 13C NMR spectroscopy data.

Authors/Creators

  • 1. Université de Reims Champagne-Ardenne, France

Description

 A method that relies on carbon-13 nuclear magnetic resonance (NMR) spectroscopy, elaborated in earlier works of the author's research group, requires the availability of a dedicated database that establishes relationships between chemical structures, biological and chemical taxonomy, and spectroscopy. The construction of such a database, called acd_lotus, was reported earlier and its usefulness was only illustrated by three examples. This dataset provides the results of structure searches carried out starting from 58 carbon-13 NMR data sets recorded on compounds selected in the metabolomics section of BMRB, the biological magnetic resonance bank.

Correction in the JSON file of ascochitine.

Addition of a CSV file according to Schymanski and Bolton for the description of the selected compounds.

Better PNG drawings for compounds 28, 38, 46, and 57.

Better PNG drawing for compounds 7 and 26.

Notes

This data set constitutes the Supplementary material of a preprint deposited in ChemRXiv by Jean-Marc Nuzillard, entitled "Use of carbon-13 NMR to identify known natural products by querying a nuclear magnetic resonance database— an assessment".

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Additional details

Related works

Is cited by
Preprint: 10.26434/chemrxiv-2023-srzq4 (DOI)