Published July 24, 2023 | Version v1
Dataset Open

BioRodDis project - Individual information on rodent samples - Jura (France) 2020/2022

  • 1. CBGP, INRAE, CIRAD, IRD, Institut Agro, Université de Montpellier, France
  • 2. Department of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland & Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland
  • 3. Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland
  • 4. CBGP, IRD, INRAE, CIRAD, Institut Agro, Université de Montpellier, France

Description

This xlxs file contains 190 rodent individuals for which the serological statut for the Puumala (PUUV) orthohantavirus was assessed by immunofluorescence assay (IFA) and enzyme-linked immunosorbent assay (ELISA). 

The table is organized with the sequencing code in row and the different individual variables in column:

Corresponding abbreviations:

- CodeID : the unique identifier of each individual

- Species: the rodent species

- Locality: the sampling locations: La Glacière=”FRFGLA”, Mignovillard=”FRFMIG”

- Sex: the sex (F=female; M=male)

- Season: the season of sampling

- Year: the year of sampling

- Period: the season and year of sampling

- Weight: the weight (g)

- Body_length: the body length (cm)

- Tail_length: the tail lenght (cm)

- Testes_position: the testes position status (0/1)

- Testes_length: the testes lenght (mm)

- Seminal_ves_dev: the seminal vesicles development status(0/1)

- Vulva: the vulva opening status (0/1)

- Lactation: the lactation status (0/1)

- Placental_scars: presence of placental scars (0/1)

- Uterus_dev: the uterus development status (0/1)

- Gestation: the gestation status (0/1)

- Sexual_Maturity: the sexual maturity (Mature or immature)

- IFA_PUUV: the PUUV serological status by IFA (0= negative; 1= positive)

- Serology: the PUUV serological status by ELISA (0= negative; 1= positive)

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Additional details

Funding

European Commission
BiodivERsA3 - Consolidating the European Research Area on biodiversity and ecosystem services 642420