UNFmontreal/Dcm2Bids: 3.0.0

We could not be more proud of the 3.0.0 dcm2bids release :blush: . We put everything we've learned from our past experiences and listen to all our users' ideas into this version.

Advanced searching criterias such as extractors combined with custom entities, the ability to compare floats or the auto_extract_entities option directly accessible from dcm2bids command will make the conversion to BIDS smoother than ever and significantly reduce the complexity and the length of your configuration file especially for multi-site acquisitions.

We highly encourage you to dive into the documentation since we added quite a lot of new features.

Please don't hesitate to give us your feedback using this discussion page.

Thank you again for all our users who contributed in some ways to this release. Thank you @SamGuay for the long discussions and late debug sessions. :tada:

Arnaud

• [DOC] fix typo and add detail about entity reordering by @Remi-Gau in https://github.com/UNFmontreal/Dcm2Bids/pull/183
• update version to match release by @SamGuay in https://github.com/UNFmontreal/Dcm2Bids/pull/185
• [ENH] Refactorisation - Major API upgrade by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/200
• Get README from bids toolkit by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/201
• Add bids-validator option by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/206
• Upgrade feature Intended for by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/207
• [ENH] Upgrade custom entities by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/208
• [FIX] Broken scaffold no more by @SamGuay in https://github.com/UNFmontreal/Dcm2Bids/pull/209
• [FIX,ENH] - Improve dcm2bids_helper mod by @SamGuay in https://github.com/UNFmontreal/Dcm2Bids/pull/210
• Generalization of sidecarchanges using ids by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/213
• [ENH] dataType -> datatype and modalityLabel -> suffix by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/214
• Fix log n version by @SamGuay in https://github.com/UNFmontreal/Dcm2Bids/pull/219
• [BF] valid participant by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/215
• Allow a criteria item to be a dict with a key - any (or) or all (and) by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/217
• Add an option to use duplicates instead of runs as suggested in heudiconv project. by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/218
• [BF] Valid session by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/222
• add test helper by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/220
• [BF] dcm2bids_scaffold by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/224
• prevent doc deployment by pushing to master by @SamGuay in https://github.com/UNFmontreal/Dcm2Bids/pull/226
• [ENH] Add major OS executables on new release by @SamGuay in https://github.com/UNFmontreal/Dcm2Bids/pull/221
• [ENH] Generalization of defaceTpl to post_op by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/225
• [ENH] Rename all cap var by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/227
• Revert doc to 2.1.9 by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/228
• Automated version-control documentation for 2.1.9 and up by @SamGuay in https://github.com/UNFmontreal/Dcm2Bids/pull/231
• Fix GHA for docs + layouts by @SamGuay in https://github.com/UNFmontreal/Dcm2Bids/pull/234
• [ENH] Add float comparison by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/229
• [Quick Fix] Add specific message when no acquisition was found by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/235
• Fix typo src_file dst_file by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/236
• Improve doc for v3.0.0 by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/223
• [FIX] - update the alias for dev and latest by @SamGuay in https://github.com/UNFmontreal/Dcm2Bids/pull/237
• Quick fix version by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/238
• Update docs by @smeisler in https://github.com/UNFmontreal/Dcm2Bids/pull/239
• [BF] fix sidecars suggested by Sam by @arnaudbore in https://github.com/UNFmontreal/Dcm2Bids/pull/243

• @Remi-Gau made their first contribution in https://github.com/UNFmontreal/Dcm2Bids/pull/183
• @smeisler made their first contribution in https://github.com/UNFmontreal/Dcm2Bids/pull/239

Full Changelog: https://github.com/UNFmontreal/Dcm2Bids/compare/2.1.9...3.0.0