Published July 13, 2023 | Version v2
Dataset Open

Drug-Cell Line-Gene heterogeneous graph from NCI60

  • 1. University of Minnesota
  • 2. Dana-Farber Cancer Institute, Harvard Medical School

Description

Dataset for "Attention-Guided Gene Importance Assessment in Drug-Cell-Gene Heterogeneous Network for Drug Response Deciphering". 

# information

- drug_cell_gene.csv.gz: Adjacency matrix of drugs, cell lines, and genes from NCI60. 
- train.csv: training data. Contains drug name and cell line name
- val.csv: validation data. Contains drug name and cell line name

- test.csv: test data. Contains drug name and cell line name

- train_values.npy: train value. Contains drug response values (Z-score)
- val_values.npy: validation value. Contains drug response values (Z-score)

- test_values.npy: test value. Contains drug response values (Z-score)

Files

data.zip

Files (38.5 MB)

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