LCSB Environmental Cheminformatics Group
Published July 13, 2023 | Version LMSD-2023-07-12
Dataset Open

LIPID MAPS® Structure Database (LMSD) formatted for MetFrag

Authors/Creators

  • 1. https://www.lipidmaps.org

Contributors

  • 1. LCSB, Uni Luxembourg

Description

This repository contains the LIPID MAPS® Structure Database (LMSD) formatted for use in MetFrag (and other workflows).

LIPID MAPS® Lipidomics Gateway is a free, comprehensive website for researchers interested in lipid biology. Use https://www.lipidmaps.org to stay abreast of developments each month from across the field, and explore the rich information collections, tools and resources from the LIPID Metabolites And Pathways Strategy (LIPID MAPS®) Consortium.
 

The workflow used to create this file (by B. Talavera Andújar) can be found here: https://gitlab.lcsb.uni.lu/eci/simple-utilities/sdf2csv

Reference: LMSD: LIPID MAPS® structure database, Sud M., Fahy E., Cotter D., Brown A., Dennis E., Glass C., Murphy R., Raetz C., Russell D., and Subramaniam S., Nucleic Acids Research, 2006, DOI: 10.1093/nar/gkl838

Notes

Please cite: LIPID MAPS® structure database, Sud M., Fahy E., Cotter D., Brown A., Dennis E., Glass C., Murphy R., Raetz C., Russell D., and Subramaniam S., Nucleic Acids Research, 2006, DOI: 10.1093/nar/gkl838

Files

LIPIDMAPS_20230712.csv

Files (27.3 MB)

Name Size Download all
md5:77e1ff66bd383db17432c661006a496a
27.3 MB Preview Download

Additional details

Related works

Cites
Journal article: 10.1093/nar/gkl838 (DOI)
Is supplement to
https://www.lipidmaps.org/ (URL)
https://www.lipidmaps.org/databases/lmsd/overview (URL)
https://msbi.ipb-halle.de/MetFrag/ (URL)