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Published June 22, 2023 | Version v1.1.0
Software Open

JannesSP/magnipore: v1.1.0

Authors/Creators

  • 1. Friedrich Schiller University Jena

Description

Version 1.1.0 Removed
  1. removed parameters:
  • strict
  • r2

  1. removed coverage plots from nanosherlock

  2. Reduce stored data in RED file

  • removed base & motif columns
Added
  1. Pytests
  • added first tests, more to be written
  • added tests to meta.yml, will be executed when using building conda package
  1. Updated Help Message in README.md
Changed

  1. Use IUPAC code for refdiff substitutions

    • Example: Y:C or Y:T is no subsitution mutation anymore, as Y = {C, T}

  2. Reduced storage of plotting data in magnipore.py

Files

JannesSP/magnipore-v1.1.0.zip

Files (410.0 kB)

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md5:76ec0c731f126b7d879cefbef4a37ed9
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Additional details

Related works

Is supplement to
https://github.com/JannesSP/magnipore/tree/v1.1.0 (URL)