Simulated brainweb PET/MR data sets for denoising and deblurring
Description
The data set consists of 20 subjects based on the normal anatomical models from the brainweb phantom. See https://brainweb.bic.mni.mcgill.ca/.
For each subjectXX the data is organized as follows:
- image_0.nii.gz -> (1st simulated "random" PET contrast)
- image_1.nii.gz -> (2nd simulated "random" PET contrast)
- image_2.nii.gz -> (3rd simulated "random" PET contrast)
- attenuation_image.nii.gz -> (attenuation image)
- t1.nii.gz -> (high resolution T1 MR)
All data sets have a shape of (220,220,184) and a voxel size of 1mm x 1mm x 1mm and are provided in nifti format.
The T1 MR scans and antomical models used to create the ground truth PET images are taken from the BrainWeb: Simulated Brain Database.
See:
http://www.bic.mni.mcgill.ca/brainweb/
C.A. Cocosco, V. Kollokian, R.K.-S. Kwan, A.C. Evans : "BrainWeb: Online Interface to a 3D MRI Simulated Brain Database"
NeuroImage, vol.5, no.4, part 2/4, S425, 1997 -- Proceedings of 3-rd International Conference on Functional Mapping of the Human Brain, Copenhagen, May 1997.
R.K.-S. Kwan, A.C. Evans, G.B. Pike : "MRI simulation-based evaluation of image-processing and classification methods"
IEEE Transactions on Medical Imaging. 18(11):1085-97, Nov 1999.
R.K.-S. Kwan, A.C. Evans, G.B. Pike : "An Extensible MRI Simulator for Post-Processing Evaluation"
Visualization in Biomedical Computing (VBC'96). Lecture Notes in Computer Science, vol. 1131. Springer-Verlag, 1996. 135-140.
D.L. Collins, A.P. Zijdenbos, V. Kollokian, J.G. Sled, N.J. Kabani, C.J. Holmes, A.C. Evans : "Design and Construction of a Realistic Digital Brain Phantom"
IEEE Transactions on Medical Imaging, vol.17, No.3, p.463--468, June 1998
Files
brainweb_petmr_v2.zip
Files
(573.3 MB)
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