Published June 17, 2023
| Version 23.1.2
Software
Open
fMRIPrep: a robust preprocessing pipeline for functional MRI
Authors/Creators
- 1. Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland
- 2. Department of Psychology, Stanford University
- 3. Neuroscience Program, University of Iowa
- 4. Montreal Neurological Institute, McGill University
- 5. Department of Psychology, Florida International University
- 6. SIMEXP Lab, CRIUGM, University of Montréal, Montréal, Canada
Contributors
Researcher (44):
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Provins, Céline1
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Finc, Karolina2
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Feingold, Franklin3
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Tooley, Ursula A.4
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Benson, Noah C.5
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de la Vega, Alejandro6
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Schaefer, Theo A.J.7
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Urchs, Sebastian8
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Waller, Lea9
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Lurie, Daniel J.10
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Heinsfeld, Anibal S.11
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Mentch, Jeff12
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Jacoby, Nir13
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Frederick, Blaise B.14
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Erramuzpe, Asier15
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Jamison, Keith W.16
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Wexler, Joseph B.3
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Plunkett, Dillon17
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Nitsch, Alexander7
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Sneve, Markus H.18
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Ma, Feilong19
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Adebimpe, Azeez20
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Amlien, Inge K.18
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Bellec, Pierre21
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Bhagwat, Nikhil8
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Cieslak, Matthew20
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Devenyi, Grabriel A.22
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Gomez, Daniel E. P.23
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Groen, Iris I. A.24
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Halchenko, Yaroslav O.19
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Isik, Ayse Ilkay25
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Liem, Franz26
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Moodie, Craig A.3
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Naveau, Mikaël27
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Rivera-Dompenciel, Adriana28
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Satterthwaite, Theodore D.20
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Sitek, Kevin R.12
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Stojić, Hrvoje29
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Thompson, William H.3
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Valabregue, Romain30
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Velasco, Pablo31
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Wright, Jessey3
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Ye, Zhifang32
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Ghosh, Satrajit S.33
- 1. Department of Radiology, Lausanne University Hospital and University of Lausanne
- 2. Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University in Toruń
- 3. Department of Psychology, Stanford University
- 4. Department of Neuroscience, University of Pennsylvania, PA, USA
- 5. Department of Psychology, New York University
- 6. University of Texas at Austin
- 7. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
- 8. Montreal Neurological Institute, McGill University
- 9. Charite Universitatsmedizin Berlin, Germany
- 10. Department of Psychology, University of California, Berkeley
- 11. Child Mind Institute
- 12. Speech & Hearing Bioscience & Technology Program, Harvard University
- 13. Department of Psychology, Columbia University
- 14. McLean Hospital Brain Imaging Center, MA, USA
- 15. Computational Neuroimaging Lab, BioCruces Health Research Institute
- 16. Department of Radiology, Weill Cornell Medicine
- 17. Department of Psychology, Harvard University
- 18. Center for Lifespan Changes in Brain and Cognition, University of Oslo
- 19. Dartmouth College: Hanover, NH, United States
- 20. Perelman School of Medicine, University of Pennsylvania, PA, USA
- 21. SIMEXP Lab, CRIUGM, University of Montréal, Montréal, Canada
- 22. Department of Psychiatry, McGill University
- 23. Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen
- 24. Department of Psychology, New York University, NY, USA
- 25. Max Planck Institute for Empirical Aesthetics
- 26. URPP Dynamics of Healthy Aging, University of Zurich
- 27. Cyceron, UMS 3408 (CNRS - UCBN), France
- 28. Neuroscience Program, University of Iowa
- 29. Max Planck UCL Centre for Computational Psychiatry and Ageing Research, University College London
- 30. CENIR, INSERM U1127, CNRS UMR 7225, UPMC Univ Paris 06 UMR S 1127, Institut du Cerveau et de la Moelle épinière, ICM, F-75013, Paris, France
- 31. Center for Brain Imaging, New York University
- 32. State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University
- 33. McGovern Institute for Brain Research, MIT, MA, USA
Description
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
Files
nipreps/fmriprep-23.1.2.zip
Files
(25.1 MB)
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Additional details
Related works
- Documents
- https://fmriprep.org (URL)
- Is part of
- 10.1038/s41592-018-0235-4 (DOI)